Cluster: C55.CMAG_2_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: C55.CMAG_2
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C55_contig_1093 | C55_contig_1093_1485 | 1585370 | 1587694 | + | 3.A.5.1.3 |
| pfam | C55_contig_1093 | C55_contig_1093_1486 | 1588102 | 1589592 | + | SLH | SLH | SLH |
| CAZyme | C55_contig_1093 | C55_contig_1093_1487 | 1589669 | 1591843 | + | GH73 |
Gene ID: C55_contig_1093_1485
Type: TC
Location: 1585370 - 1587694 (+)
Type: TC
Location: 1585370 - 1587694 (+)
Gene ID: C55_contig_1093_1486
Type: pfam
Location: 1588102 - 1589592 (+)
Type: pfam
Location: 1588102 - 1589592 (+)
Gene ID: C55_contig_1093_1487
Type: CAZyme
Location: 1589669 - 1591843 (+)
Type: CAZyme
Location: 1589669 - 1591843 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Romboutsia
Species
Romboutsia timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C55_contig_1093_1487 | vegan > omnivore | 1.63264 | 0.00574 |
| C55_contig_1093_1487 | vegetarian > omnivore | 1.72796 | 0.02011 |