dbCAN Logo

Cluster: C54.bin_3_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C54_contig_3632 C54_contig_3632_459 513637 514938 - GH16_3
pfam C54_contig_3632 C54_contig_3632_460 515159 516148 - 2-Hacid_dh | 2-Hacid_dh_C | NAD_binding_2
TC C54_contig_3632 C54_contig_3632_461 516267 516932 - 3.A.2.2.2
TC C54_contig_3632 C54_contig_3632_462 517356 518729 - 3.A.2.2.2
TC C54_contig_3632 C54_contig_3632_463 518731 520503 - 3.A.2.3.2
TC C54_contig_3632 C54_contig_3632_464 520557 520871 - 3.A.2.2.2
pfam C54_contig_3632 C54_contig_3632_465 520864 521832 - vATP-synt_AC39
pfam C54_contig_3632 C54_contig_3632_466 521845 522438 - vATP-synt_E
TC C54_contig_3632 C54_contig_3632_467 522448 522936 - 3.A.2.2.2
TC C54_contig_3632 C54_contig_3632_468 522939 524951 - 3.A.2.2.2
Gene ID: C54_contig_3632_459
Type: CAZyme
Location: 513637 - 514938 (-)
Gene ID: C54_contig_3632_460
Type: pfam
Location: 515159 - 516148 (-)
Gene ID: C54_contig_3632_461
Type: TC
Location: 516267 - 516932 (-)
Gene ID: C54_contig_3632_462
Type: TC
Location: 517356 - 518729 (-)
Gene ID: C54_contig_3632_463
Type: TC
Location: 518731 - 520503 (-)
Gene ID: C54_contig_3632_464
Type: TC
Location: 520557 - 520871 (-)
Gene ID: C54_contig_3632_465
Type: pfam
Location: 520864 - 521832 (-)
Gene ID: C54_contig_3632_466
Type: pfam
Location: 521845 - 522438 (-)
Gene ID: C54_contig_3632_467
Type: TC
Location: 522448 - 522936 (-)
Gene ID: C54_contig_3632_468
Type: TC
Location: 522939 - 524951 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List