Cluster: C54.bin_3_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: C54.bin_3
- CGC Family ID: CGCFAM_03547
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C54_contig_3632 | C54_contig_3632_288 | 330227 | 332170 | - | CBM13 | CBM56 | GH16_3 |
| pfam | C54_contig_3632 | C54_contig_3632_289 | 332267 | 333037 | - | TraX |
| CAZyme | C54_contig_3632 | C54_contig_3632_290 | 333054 | 334883 | - | GH13_11 |
| NULL(UNKNOWN) | C54_contig_3632 | C54_contig_3632_291 | 334919 | 335404 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C54_contig_3632 | C54_contig_3632_292 | 335580 | 337214 | + | 3.A.1.121.4 |
Gene ID: C54_contig_3632_288
Type: CAZyme
Location: 330227 - 332170 (-)
Type: CAZyme
Location: 330227 - 332170 (-)
Gene ID: C54_contig_3632_289
Type: pfam
Location: 332267 - 333037 (-)
Type: pfam
Location: 332267 - 333037 (-)
Gene ID: C54_contig_3632_290
Type: CAZyme
Location: 333054 - 334883 (-)
Type: CAZyme
Location: 333054 - 334883 (-)
Gene ID: C54_contig_3632_291
Type:
Location: 334919 - 335404 (-)
Type:
Location: 334919 - 335404 (-)
Gene ID: C54_contig_3632_292
Type: TC
Location: 335580 - 337214 (+)
Type: TC
Location: 335580 - 337214 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_G
Species
Eubacterium_G sp900550135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.