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Cluster: C54.bin_3_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C54_contig_176 C54_contig_176_812 926031 926708 + 9.B.143.2.3
pfam C54_contig_176 C54_contig_176_813 926776 927873 + Exo_endo_phos
TC C54_contig_176 C54_contig_176_814 927946 930114 + 4.A.1.1.13
TC C54_contig_176 C54_contig_176_815 930448 934383 + 2.A.6.3.6
pfam C54_contig_176 C54_contig_176_816 934645 935493 + BacA
pfam C54_contig_176 C54_contig_176_817 935636 936367 + VTT_dom
CAZyme C54_contig_176 C54_contig_176_818 936622 940587 + GH81
pfam C54_contig_176 C54_contig_176_819 940855 942339 + PK | PK_C
NULL(UNKNOWN) C54_contig_176 C54_contig_176_820 942737 942832 + NULL(UNKNOWN)
[View Structural Homologs]
TC C54_contig_176 C54_contig_176_821 942872 944323 + 1.A.26.1.3
pfam C54_contig_176 C54_contig_176_822 944471 945013 - ECF_trnsprt
STP C54_contig_176 C54_contig_176_823 944997 946535 - Fer4 | Fer4
TC C54_contig_176 C54_contig_176_824 946909 948285 + 2.A.66.1.32
Gene ID: C54_contig_176_812
Type: TC
Location: 926031 - 926708 (+)
Gene ID: C54_contig_176_813
Type: pfam
Location: 926776 - 927873 (+)
Gene ID: C54_contig_176_814
Type: TC
Location: 927946 - 930114 (+)
Gene ID: C54_contig_176_815
Type: TC
Location: 930448 - 934383 (+)
Gene ID: C54_contig_176_816
Type: pfam
Location: 934645 - 935493 (+)
Gene ID: C54_contig_176_817
Type: pfam
Location: 935636 - 936367 (+)
Gene ID: C54_contig_176_818
Type: CAZyme
Location: 936622 - 940587 (+)
Gene ID: C54_contig_176_819
Type: pfam
Location: 940855 - 942339 (+)
Gene ID: C54_contig_176_820
Type:
Location: 942737 - 942832 (+)
Gene ID: C54_contig_176_821
Type: TC
Location: 942872 - 944323 (+)
Gene ID: C54_contig_176_822
Type: pfam
Location: 944471 - 945013 (-)
Gene ID: C54_contig_176_823
Type: STP
Location: 944997 - 946535 (-)
Gene ID: C54_contig_176_824
Type: TC
Location: 946909 - 948285 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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