Cluster: C54.bin_3_CGC20
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 5
- Substrate:
- Genome ID: C54.bin_3
- CGC Family ID: CGCFAM_01927
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C54_contig_176 | C54_contig_176_611 | 717216 | 718166 | + | 3.A.1.1.23 |
| TC | C54_contig_176 | C54_contig_176_612 | 718183 | 719052 | + | 3.A.1.1.39 |
| pfam | C54_contig_176 | C54_contig_176_613 | 719064 | 721127 | + | Yip1 |
| pfam | C54_contig_176 | C54_contig_176_614 | 721111 | 723642 | + | DUF5696 |
| TC | C54_contig_176 | C54_contig_176_615 | 723642 | 724730 | + | 3.A.1.1.48 |
| TC | C54_contig_176 | C54_contig_176_616 | 724720 | 725676 | + | 3.A.1.1.27 |
| CAZyme | C54_contig_176 | C54_contig_176_617 | 725741 | 727135 | + | GH16_3 |
| TF | C54_contig_176 | C54_contig_176_618 | 727213 | 728211 | + | LacI |
| CAZyme | C54_contig_176 | C54_contig_176_619 | 728223 | 731402 | + | GH161 |
| CAZyme | C54_contig_176 | C54_contig_176_620 | 731832 | 734528 | + | GH94 |
| CAZyme | C54_contig_176 | C54_contig_176_621 | 734664 | 735566 | + | GH17 |
| CAZyme | C54_contig_176 | C54_contig_176_622 | 735853 | 737712 | + | CBM32 |
Gene ID: C54_contig_176_611
Type: TC
Location: 717216 - 718166 (+)
Type: TC
Location: 717216 - 718166 (+)
Gene ID: C54_contig_176_612
Type: TC
Location: 718183 - 719052 (+)
Type: TC
Location: 718183 - 719052 (+)
Gene ID: C54_contig_176_613
Type: pfam
Location: 719064 - 721127 (+)
Type: pfam
Location: 719064 - 721127 (+)
Gene ID: C54_contig_176_614
Type: pfam
Location: 721111 - 723642 (+)
Type: pfam
Location: 721111 - 723642 (+)
Gene ID: C54_contig_176_615
Type: TC
Location: 723642 - 724730 (+)
Type: TC
Location: 723642 - 724730 (+)
Gene ID: C54_contig_176_616
Type: TC
Location: 724720 - 725676 (+)
Type: TC
Location: 724720 - 725676 (+)
Gene ID: C54_contig_176_617
Type: CAZyme
Location: 725741 - 727135 (+)
Type: CAZyme
Location: 725741 - 727135 (+)
Gene ID: C54_contig_176_618
Type: TF
Location: 727213 - 728211 (+)
Type: TF
Location: 727213 - 728211 (+)
Gene ID: C54_contig_176_619
Type: CAZyme
Location: 728223 - 731402 (+)
Type: CAZyme
Location: 728223 - 731402 (+)
Gene ID: C54_contig_176_620
Type: CAZyme
Location: 731832 - 734528 (+)
Type: CAZyme
Location: 731832 - 734528 (+)
Gene ID: C54_contig_176_621
Type: CAZyme
Location: 734664 - 735566 (+)
Type: CAZyme
Location: 734664 - 735566 (+)
Gene ID: C54_contig_176_622
Type: CAZyme
Location: 735853 - 737712 (+)
Type: CAZyme
Location: 735853 - 737712 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_G
Species
Eubacterium_G sp900550135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.