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Cluster: C54.bin_3_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C54_contig_176 C54_contig_176_508 596753 597391 + 3.A.1.12.8
TC C54_contig_176 C54_contig_176_509 597427 598335 + 3.A.1.12.10
STP C54_contig_176 C54_contig_176_510 598541 599440 + Fer4 | Fer4
TC C54_contig_176 C54_contig_176_511 599442 600209 + 3.A.1.12.4
TC C54_contig_176 C54_contig_176_512 600209 600835 + 3.A.1.12.8
STP C54_contig_176 C54_contig_176_513 600835 602133 + Aminotran_1_2
TF C54_contig_176 C54_contig_176_514 602149 602592 + Rrf2
TC C54_contig_176 C54_contig_176_515 602871 604508 + 2.A.35.2.1
TC C54_contig_176 C54_contig_176_516 604583 605017 + 1.A.22.1.4
CAZyme C54_contig_176 C54_contig_176_517 605283 607913 + GH16_3
Gene ID: C54_contig_176_508
Type: TC
Location: 596753 - 597391 (+)
Gene ID: C54_contig_176_509
Type: TC
Location: 597427 - 598335 (+)
Gene ID: C54_contig_176_510
Type: STP
Location: 598541 - 599440 (+)
Gene ID: C54_contig_176_511
Type: TC
Location: 599442 - 600209 (+)
Gene ID: C54_contig_176_512
Type: TC
Location: 600209 - 600835 (+)
Gene ID: C54_contig_176_513
Type: STP
Location: 600835 - 602133 (+)
Gene ID: C54_contig_176_514
Type: TF
Location: 602149 - 602592 (+)
Gene ID: C54_contig_176_515
Type: TC
Location: 602871 - 604508 (+)
Gene ID: C54_contig_176_516
Type: TC
Location: 604583 - 605017 (+)
Gene ID: C54_contig_176_517
Type: CAZyme
Location: 605283 - 607913 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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