Cluster: C54.bin_3_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: C54.bin_3
- CGC Family ID: CGCFAM_07931
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C54_contig_176 | C54_contig_176_385 | 447658 | 449427 | + | 3.A.1.135.6 |
| TC | C54_contig_176 | C54_contig_176_386 | 449420 | 451213 | + | 3.A.1.135.6 |
| pfam | C54_contig_176 | C54_contig_176_387 | 451515 | 453482 | + | LRR_5 | LRR_5 |
| TC | C54_contig_176 | C54_contig_176_388 | 453490 | 454044 | + | 2.A.51.1.6 |
| TC | C54_contig_176 | C54_contig_176_389 | 454056 | 454625 | + | 2.A.51.1.6 |
| CAZyme | C54_contig_176 | C54_contig_176_390 | 454953 | 460073 | + | CBM32 | CBM32 | CBM32 | CBM32 | CBM32 | GH81 |
Gene ID: C54_contig_176_385
Type: TC
Location: 447658 - 449427 (+)
Type: TC
Location: 447658 - 449427 (+)
Gene ID: C54_contig_176_386
Type: TC
Location: 449420 - 451213 (+)
Type: TC
Location: 449420 - 451213 (+)
Gene ID: C54_contig_176_387
Type: pfam
Location: 451515 - 453482 (+)
Type: pfam
Location: 451515 - 453482 (+)
Gene ID: C54_contig_176_388
Type: TC
Location: 453490 - 454044 (+)
Type: TC
Location: 453490 - 454044 (+)
Gene ID: C54_contig_176_389
Type: TC
Location: 454056 - 454625 (+)
Type: TC
Location: 454056 - 454625 (+)
Gene ID: C54_contig_176_390
Type: CAZyme
Location: 454953 - 460073 (+)
Type: CAZyme
Location: 454953 - 460073 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_G
Species
Eubacterium_G sp900550135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.