Cluster: C54.bin_3_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: C54.bin_3
- CGC Family ID: CGCFAM_00011
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C54_contig_176 | C54_contig_176_349 | 399347 | 401542 | + | GT2 |
| NULL(UNKNOWN) | C54_contig_176 | C54_contig_176_350 | 401739 | 403181 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C54_contig_176 | C54_contig_176_351 | 403449 | 405968 | + | 3.A.3.5.15 |
| pfam | C54_contig_176 | C54_contig_176_352 | 406196 | 407854 | - | Glyphos_transf |
| CAZyme | C54_contig_176 | C54_contig_176_353 | 407864 | 410323 | - | GT4 |
| TC | C54_contig_176 | C54_contig_176_354 | 410507 | 411307 | + | 3.A.1.103.4 |
| TC | C54_contig_176 | C54_contig_176_355 | 411316 | 412059 | + | 3.A.1.103.5 |
Gene ID: C54_contig_176_349
Type: CAZyme
Location: 399347 - 401542 (+)
Type: CAZyme
Location: 399347 - 401542 (+)
Gene ID: C54_contig_176_350
Type:
Location: 401739 - 403181 (-)
Type:
Location: 401739 - 403181 (-)
Gene ID: C54_contig_176_351
Type: TC
Location: 403449 - 405968 (+)
Type: TC
Location: 403449 - 405968 (+)
Gene ID: C54_contig_176_352
Type: pfam
Location: 406196 - 407854 (-)
Type: pfam
Location: 406196 - 407854 (-)
Gene ID: C54_contig_176_353
Type: CAZyme
Location: 407864 - 410323 (-)
Type: CAZyme
Location: 407864 - 410323 (-)
Gene ID: C54_contig_176_354
Type: TC
Location: 410507 - 411307 (+)
Type: TC
Location: 410507 - 411307 (+)
Gene ID: C54_contig_176_355
Type: TC
Location: 411316 - 412059 (+)
Type: TC
Location: 411316 - 412059 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_G
Species
Eubacterium_G sp900550135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.