Cluster: C54.bin_3_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: C54.bin_3
- CGC Family ID: CGCFAM_01530
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C54_contig_176 | C54_contig_176_339 | 387426 | 390242 | + | GT2 |
| TC | C54_contig_176 | C54_contig_176_340 | 390294 | 390893 | + | 9.B.104.1.3 |
| pfam | C54_contig_176 | C54_contig_176_341 | 390912 | 391325 | + | HIT | DcpS_C |
| CAZyme | C54_contig_176 | C54_contig_176_342 | 391604 | 392665 | - | GT28 |
| pfam | C54_contig_176 | C54_contig_176_343 | 392701 | 394074 | - | LytR_cpsA_psr |
| TC | C54_contig_176 | C54_contig_176_344 | 394328 | 395689 | + | 9.B.18.1.3 |
| CAZyme | C54_contig_176 | C54_contig_176_345 | 395699 | 396520 | + | GT2 |
Gene ID: C54_contig_176_339
Type: CAZyme
Location: 387426 - 390242 (+)
Type: CAZyme
Location: 387426 - 390242 (+)
Gene ID: C54_contig_176_340
Type: TC
Location: 390294 - 390893 (+)
Type: TC
Location: 390294 - 390893 (+)
Gene ID: C54_contig_176_341
Type: pfam
Location: 390912 - 391325 (+)
Type: pfam
Location: 390912 - 391325 (+)
Gene ID: C54_contig_176_342
Type: CAZyme
Location: 391604 - 392665 (-)
Type: CAZyme
Location: 391604 - 392665 (-)
Gene ID: C54_contig_176_343
Type: pfam
Location: 392701 - 394074 (-)
Type: pfam
Location: 392701 - 394074 (-)
Gene ID: C54_contig_176_344
Type: TC
Location: 394328 - 395689 (+)
Type: TC
Location: 394328 - 395689 (+)
Gene ID: C54_contig_176_345
Type: CAZyme
Location: 395699 - 396520 (+)
Type: CAZyme
Location: 395699 - 396520 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_G
Species
Eubacterium_G sp900550135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.