Cluster: C54.bin_3_CGC13
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 7
- Substrate:
- Genome ID: C54.bin_3
- CGC Family ID: CGCFAM_00002
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C54_contig_176 | C54_contig_176_164 | 185646 | 186509 | - | GT2 |
| pfam | C54_contig_176 | C54_contig_176_165 | 186521 | 187663 | - | PS_pyruv_trans |
| CAZyme | C54_contig_176 | C54_contig_176_166 | 187666 | 189012 | - | GT4 |
| STP | C54_contig_176 | C54_contig_176_167 | 189015 | 190151 | - | Fer4 |
| CAZyme | C54_contig_176 | C54_contig_176_168 | 190141 | 191370 | - | GT4 |
| NULL(UNKNOWN) | C54_contig_176 | C54_contig_176_169 | 191385 | 192752 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C54_contig_176 | C54_contig_176_170 | 192761 | 193534 | - | GT32 |
| CAZyme | C54_contig_176 | C54_contig_176_171 | 193564 | 194889 | - | GT4 |
| CAZyme | C54_contig_176 | C54_contig_176_172 | 194891 | 196084 | - | GT4 |
| NULL(UNKNOWN) | C54_contig_176 | C54_contig_176_173 | 196045 | 197154 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C54_contig_176 | C54_contig_176_174 | 197174 | 198373 | - | GT4 |
| TC | C54_contig_176 | C54_contig_176_175 | 198424 | 199866 | - | 9.B.18.1.2 |
| NULL(UNKNOWN) | C54_contig_176 | C54_contig_176_176 | 200195 | 200647 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C54_contig_176 | C54_contig_176_177 | 200736 | 201527 | + | 1.E.12.1.3 |
Gene ID: C54_contig_176_164
Type: CAZyme
Location: 185646 - 186509 (-)
Type: CAZyme
Location: 185646 - 186509 (-)
Gene ID: C54_contig_176_165
Type: pfam
Location: 186521 - 187663 (-)
Type: pfam
Location: 186521 - 187663 (-)
Gene ID: C54_contig_176_166
Type: CAZyme
Location: 187666 - 189012 (-)
Type: CAZyme
Location: 187666 - 189012 (-)
Gene ID: C54_contig_176_167
Type: STP
Location: 189015 - 190151 (-)
Type: STP
Location: 189015 - 190151 (-)
Gene ID: C54_contig_176_168
Type: CAZyme
Location: 190141 - 191370 (-)
Type: CAZyme
Location: 190141 - 191370 (-)
Gene ID: C54_contig_176_169
Type:
Location: 191385 - 192752 (-)
Type:
Location: 191385 - 192752 (-)
Gene ID: C54_contig_176_170
Type: CAZyme
Location: 192761 - 193534 (-)
Type: CAZyme
Location: 192761 - 193534 (-)
Gene ID: C54_contig_176_171
Type: CAZyme
Location: 193564 - 194889 (-)
Type: CAZyme
Location: 193564 - 194889 (-)
Gene ID: C54_contig_176_172
Type: CAZyme
Location: 194891 - 196084 (-)
Type: CAZyme
Location: 194891 - 196084 (-)
Gene ID: C54_contig_176_173
Type:
Location: 196045 - 197154 (-)
Type:
Location: 196045 - 197154 (-)
Gene ID: C54_contig_176_174
Type: CAZyme
Location: 197174 - 198373 (-)
Type: CAZyme
Location: 197174 - 198373 (-)
Gene ID: C54_contig_176_175
Type: TC
Location: 198424 - 199866 (-)
Type: TC
Location: 198424 - 199866 (-)
Gene ID: C54_contig_176_176
Type:
Location: 200195 - 200647 (+)
Type:
Location: 200195 - 200647 (+)
Gene ID: C54_contig_176_177
Type: TC
Location: 200736 - 201527 (+)
Type: TC
Location: 200736 - 201527 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_G
Species
Eubacterium_G sp900550135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.