Cluster: C54.bin_3_CGC12
🧬 Cluster Details
- Gene Count: 19
- CAZyme Count: 12
- Substrate:
- Genome ID: C54.bin_3
- CGC Family ID: CGCFAM_00006
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C54_contig_176 | C54_contig_176_133 | 151920 | 153446 | - | 2.A.66.1.40 |
| pfam | C54_contig_176 | C54_contig_176_134 | 153448 | 154521 | - | PS_pyruv_trans |
| CAZyme | C54_contig_176 | C54_contig_176_135 | 154544 | 155410 | - | GT8 |
| CAZyme | C54_contig_176 | C54_contig_176_136 | 155446 | 156303 | - | GT8 |
| CAZyme | C54_contig_176 | C54_contig_176_137 | 156305 | 157324 | - | GT2 |
| TC | C54_contig_176 | C54_contig_176_138 | 157331 | 158362 | - | 9.B.97.1.4 |
| CAZyme | C54_contig_176 | C54_contig_176_139 | 158397 | 158927 | - | GT4 |
| pfam | C54_contig_176 | C54_contig_176_140 | 159056 | 160054 | - | Acyl_transf_3 |
| CAZyme | C54_contig_176 | C54_contig_176_141 | 160044 | 161165 | - | GT4 |
| CAZyme | C54_contig_176 | C54_contig_176_142 | 161162 | 162346 | - | GT4 |
| CAZyme | C54_contig_176 | C54_contig_176_143 | 162485 | 163501 | - | GT2 |
| CAZyme | C54_contig_176 | C54_contig_176_144 | 163515 | 164597 | - | GT4 |
| CAZyme | C54_contig_176 | C54_contig_176_145 | 164622 | 165782 | - | GT2 |
| NULL(UNKNOWN) | C54_contig_176 | C54_contig_176_146 | 165788 | 166894 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | C54_contig_176 | C54_contig_176_147 | 166894 | 167889 | - | Acyl_transf_3 |
| CAZyme | C54_contig_176 | C54_contig_176_148 | 167934 | 169070 | - | GT4 |
| pfam | C54_contig_176 | C54_contig_176_149 | 169079 | 169561 | - | Hexapep | Hexapep_2 |
| CAZyme | C54_contig_176 | C54_contig_176_150 | 169681 | 170925 | - | GT4 |
| CAZyme | C54_contig_176 | C54_contig_176_151 | 170937 | 172058 | - | GT4 |
Gene ID: C54_contig_176_133
Type: TC
Location: 151920 - 153446 (-)
Type: TC
Location: 151920 - 153446 (-)
Gene ID: C54_contig_176_134
Type: pfam
Location: 153448 - 154521 (-)
Type: pfam
Location: 153448 - 154521 (-)
Gene ID: C54_contig_176_135
Type: CAZyme
Location: 154544 - 155410 (-)
Type: CAZyme
Location: 154544 - 155410 (-)
Gene ID: C54_contig_176_136
Type: CAZyme
Location: 155446 - 156303 (-)
Type: CAZyme
Location: 155446 - 156303 (-)
Gene ID: C54_contig_176_137
Type: CAZyme
Location: 156305 - 157324 (-)
Type: CAZyme
Location: 156305 - 157324 (-)
Gene ID: C54_contig_176_138
Type: TC
Location: 157331 - 158362 (-)
Type: TC
Location: 157331 - 158362 (-)
Gene ID: C54_contig_176_139
Type: CAZyme
Location: 158397 - 158927 (-)
Type: CAZyme
Location: 158397 - 158927 (-)
Gene ID: C54_contig_176_140
Type: pfam
Location: 159056 - 160054 (-)
Type: pfam
Location: 159056 - 160054 (-)
Gene ID: C54_contig_176_141
Type: CAZyme
Location: 160044 - 161165 (-)
Type: CAZyme
Location: 160044 - 161165 (-)
Gene ID: C54_contig_176_142
Type: CAZyme
Location: 161162 - 162346 (-)
Type: CAZyme
Location: 161162 - 162346 (-)
Gene ID: C54_contig_176_143
Type: CAZyme
Location: 162485 - 163501 (-)
Type: CAZyme
Location: 162485 - 163501 (-)
Gene ID: C54_contig_176_144
Type: CAZyme
Location: 163515 - 164597 (-)
Type: CAZyme
Location: 163515 - 164597 (-)
Gene ID: C54_contig_176_145
Type: CAZyme
Location: 164622 - 165782 (-)
Type: CAZyme
Location: 164622 - 165782 (-)
Gene ID: C54_contig_176_146
Type:
Location: 165788 - 166894 (-)
Type:
Location: 165788 - 166894 (-)
Gene ID: C54_contig_176_147
Type: pfam
Location: 166894 - 167889 (-)
Type: pfam
Location: 166894 - 167889 (-)
Gene ID: C54_contig_176_148
Type: CAZyme
Location: 167934 - 169070 (-)
Type: CAZyme
Location: 167934 - 169070 (-)
Gene ID: C54_contig_176_149
Type: pfam
Location: 169079 - 169561 (-)
Type: pfam
Location: 169079 - 169561 (-)
Gene ID: C54_contig_176_150
Type: CAZyme
Location: 169681 - 170925 (-)
Type: CAZyme
Location: 169681 - 170925 (-)
Gene ID: C54_contig_176_151
Type: CAZyme
Location: 170937 - 172058 (-)
Type: CAZyme
Location: 170937 - 172058 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_G
Species
Eubacterium_G sp900550135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.