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Cluster: C46.bin_3_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C46_contig_254 C46_contig_254_922 991940 992722 - 2.A.5.5.2
pfam C46_contig_254 C46_contig_254_923 992964 993347 - zf-CHY
TC C46_contig_254 C46_contig_254_924 993331 993915 - 3.A.1.25.5
TF C46_contig_254 C46_contig_254_925 994012 995496 - HTH_AraC | HTH_AraC
TC C46_contig_254 C46_contig_254_926 995551 997371 - 8.A.59.2.1
TC C46_contig_254 C46_contig_254_927 997406 998245 - 3.A.1.1.44
TC C46_contig_254 C46_contig_254_928 998261 999169 - 3.A.1.1.25
STP C46_contig_254 C46_contig_254_929 999258 1000529 - SBP_bac_1
CAZyme C46_contig_254 C46_contig_254_930 1000879 1002048 + GH109
Gene ID: C46_contig_254_922
Type: TC
Location: 991940 - 992722 (-)
Gene ID: C46_contig_254_923
Type: pfam
Location: 992964 - 993347 (-)
Gene ID: C46_contig_254_924
Type: TC
Location: 993331 - 993915 (-)
Gene ID: C46_contig_254_925
Type: TF
Location: 994012 - 995496 (-)
Gene ID: C46_contig_254_926
Type: TC
Location: 995551 - 997371 (-)
Gene ID: C46_contig_254_927
Type: TC
Location: 997406 - 998245 (-)
Gene ID: C46_contig_254_928
Type: TC
Location: 998261 - 999169 (-)
Gene ID: C46_contig_254_929
Type: STP
Location: 999258 - 1000529 (-)
Gene ID: C46_contig_254_930
Type: CAZyme
Location: 1000879 - 1002048 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C46_contig_254_924 vegan > omnivore 1.22469 0.00454

🧭 Explore Read Mapping of CGC

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