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Cluster: C46.bin_3_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C46_contig_254 C46_contig_254_444 451430 452203 - 9.B.141.1.2
pfam C46_contig_254 C46_contig_254_445 452200 453300 - YibE_F
CAZyme C46_contig_254 C46_contig_254_446 453506 455449 - GH127
TC C46_contig_254 C46_contig_254_447 455562 456398 - 3.A.1.1.41
TC C46_contig_254 C46_contig_254_448 456398 457309 - 3.A.1.1.19
TC C46_contig_254 C46_contig_254_449 457485 458711 - 3.A.1.1.40
STP C46_contig_254 C46_contig_254_450 458875 460053 - SBP_bac_1
TF C46_contig_254 C46_contig_254_451 460128 461642 - HTH_AraC
TC C46_contig_254 C46_contig_254_452 461709 463502 - 8.A.59.2.1
Gene ID: C46_contig_254_444
Type: TC
Location: 451430 - 452203 (-)
Gene ID: C46_contig_254_445
Type: pfam
Location: 452200 - 453300 (-)
Gene ID: C46_contig_254_446
Type: CAZyme
Location: 453506 - 455449 (-)
Gene ID: C46_contig_254_447
Type: TC
Location: 455562 - 456398 (-)
Gene ID: C46_contig_254_448
Type: TC
Location: 456398 - 457309 (-)
Gene ID: C46_contig_254_449
Type: TC
Location: 457485 - 458711 (-)
Gene ID: C46_contig_254_450
Type: STP
Location: 458875 - 460053 (-)
Gene ID: C46_contig_254_451
Type: TF
Location: 460128 - 461642 (-)
Gene ID: C46_contig_254_452
Type: TC
Location: 461709 - 463502 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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