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Cluster: C46.bin_3_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C46_contig_254 C46_contig_254_370 375097 375966 - 3.A.1.149.1
TF C46_contig_254 C46_contig_254_371 375967 376344 - GntR
pfam C46_contig_254 C46_contig_254_372 376557 377462 - TpcC
CAZyme C46_contig_254 C46_contig_254_373 377477 378481 - GH23
NULL(UNKNOWN) C46_contig_254 C46_contig_254_374 378478 380637 - NULL(UNKNOWN)
[View Structural Homologs]
TC C46_contig_254 C46_contig_254_375 380643 383093 - 3.A.7.14.2
Gene ID: C46_contig_254_370
Type: TC
Location: 375097 - 375966 (-)
Gene ID: C46_contig_254_371
Type: TF
Location: 375967 - 376344 (-)
Gene ID: C46_contig_254_372
Type: pfam
Location: 376557 - 377462 (-)
Gene ID: C46_contig_254_373
Type: CAZyme
Location: 377477 - 378481 (-)
Gene ID: C46_contig_254_374
Type:
Location: 378478 - 380637 (-)
Gene ID: C46_contig_254_375
Type: TC
Location: 380643 - 383093 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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