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Cluster: C46.bin_3_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C46_contig_120 C46_contig_120_1165 1295722 1296666 - GT2
pfam C46_contig_120 C46_contig_120_1166 1296755 1298185 - LytR_cpsA_psr
TC C46_contig_120 C46_contig_120_1167 1298203 1299606 - 9.B.18.1.1
CAZyme C46_contig_120 C46_contig_120_1168 1299690 1300646 - GT2
CAZyme C46_contig_120 C46_contig_120_1169 1300628 1302535 - GT2 | GT2
peptidase C46_contig_120 C46_contig_120_1170 1302608 1303978 + S11.UPW
pfam C46_contig_120 C46_contig_120_1171 1304085 1305545 - DUF2142
CAZyme C46_contig_120 C46_contig_120_1172 1305564 1308008 - GT2 | GT2
CAZyme C46_contig_120 C46_contig_120_1173 1308010 1310517 - GT2 | GT2
pfam C46_contig_120 C46_contig_120_1174 1310520 1312712 - RrnaAD | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25
TC C46_contig_120 C46_contig_120_1175 1312768 1314048 - 3.A.1.103.6
TC C46_contig_120 C46_contig_120_1176 1314107 1314922 - 3.A.1.104.1
Gene ID: C46_contig_120_1165
Type: CAZyme
Location: 1295722 - 1296666 (-)
Gene ID: C46_contig_120_1166
Type: pfam
Location: 1296755 - 1298185 (-)
Gene ID: C46_contig_120_1167
Type: TC
Location: 1298203 - 1299606 (-)
Gene ID: C46_contig_120_1168
Type: CAZyme
Location: 1299690 - 1300646 (-)
Gene ID: C46_contig_120_1169
Type: CAZyme
Location: 1300628 - 1302535 (-)
Gene ID: C46_contig_120_1170
Type: peptidase
Location: 1302608 - 1303978 (+)
Gene ID: C46_contig_120_1171
Type: pfam
Location: 1304085 - 1305545 (-)
Gene ID: C46_contig_120_1172
Type: CAZyme
Location: 1305564 - 1308008 (-)
Gene ID: C46_contig_120_1173
Type: CAZyme
Location: 1308010 - 1310517 (-)
Gene ID: C46_contig_120_1174
Type: pfam
Location: 1310520 - 1312712 (-)
Gene ID: C46_contig_120_1175
Type: TC
Location: 1312768 - 1314048 (-)
Gene ID: C46_contig_120_1176
Type: TC
Location: 1314107 - 1314922 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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