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Cluster: C46.bin_3_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C46_contig_120 C46_contig_120_1122 1240664 1243114 - GH2
NULL(UNKNOWN) C46_contig_120 C46_contig_120_1123 1243092 1245338 - NULL(UNKNOWN)
[View Structural Homologs]
pfam C46_contig_120 C46_contig_120_1124 1245383 1246849 - DUF3502
TC C46_contig_120 C46_contig_120_1125 1246876 1247793 - 3.A.1.1.29
TC C46_contig_120 C46_contig_120_1126 1247811 1248782 - 3.A.1.1.29
pfam C46_contig_120 C46_contig_120_1127 1248878 1250371 - DUF3502 | SBP_bac_8
TF C46_contig_120 C46_contig_120_1128 1250519 1252036 - HTH_AraC | HTH_AraC
TC C46_contig_120 C46_contig_120_1129 1252014 1253729 - 8.A.59.2.1
CAZyme C46_contig_120 C46_contig_120_1130 1253876 1256995 - GH38
CAZyme C46_contig_120 C46_contig_120_1131 1257101 1258396 - GH125
CAZyme C46_contig_120 C46_contig_120_1132 1258447 1261266 - CBM32 | GH85
Gene ID: C46_contig_120_1122
Type: CAZyme
Location: 1240664 - 1243114 (-)
Gene ID: C46_contig_120_1123
Type:
Location: 1243092 - 1245338 (-)
Gene ID: C46_contig_120_1124
Type: pfam
Location: 1245383 - 1246849 (-)
Gene ID: C46_contig_120_1125
Type: TC
Location: 1246876 - 1247793 (-)
Gene ID: C46_contig_120_1126
Type: TC
Location: 1247811 - 1248782 (-)
Gene ID: C46_contig_120_1127
Type: pfam
Location: 1248878 - 1250371 (-)
Gene ID: C46_contig_120_1128
Type: TF
Location: 1250519 - 1252036 (-)
Gene ID: C46_contig_120_1129
Type: TC
Location: 1252014 - 1253729 (-)
Gene ID: C46_contig_120_1130
Type: CAZyme
Location: 1253876 - 1256995 (-)
Gene ID: C46_contig_120_1131
Type: CAZyme
Location: 1257101 - 1258396 (-)
Gene ID: C46_contig_120_1132
Type: CAZyme
Location: 1258447 - 1261266 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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