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Cluster: C46.bin_3_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C46_contig_120 C46_contig_120_854 938822 940492 + GH13_31
TF C46_contig_120 C46_contig_120_855 940701 941756 + LacI
CAZyme C46_contig_120 C46_contig_120_856 941908 943572 - GH13_31
TF C46_contig_120 C46_contig_120_857 943766 944701 - HTH_AraC | HTH_AraC
STP C46_contig_120 C46_contig_120_858 944789 946036 - SBP_bac_1
CAZyme C46_contig_120 C46_contig_120_859 946055 947164 - GH172
TC C46_contig_120 C46_contig_120_860 947200 948057 - 3.A.1.1.17
TC C46_contig_120 C46_contig_120_861 948071 948949 - 3.A.1.1.41
STP C46_contig_120 C46_contig_120_862 949073 950308 - SBP_bac_1
TC C46_contig_120 C46_contig_120_863 950582 952426 + 8.A.59.2.1
Gene ID: C46_contig_120_854
Type: CAZyme
Location: 938822 - 940492 (+)
Gene ID: C46_contig_120_855
Type: TF
Location: 940701 - 941756 (+)
Gene ID: C46_contig_120_856
Type: CAZyme
Location: 941908 - 943572 (-)
Gene ID: C46_contig_120_857
Type: TF
Location: 943766 - 944701 (-)
Gene ID: C46_contig_120_858
Type: STP
Location: 944789 - 946036 (-)
Gene ID: C46_contig_120_859
Type: CAZyme
Location: 946055 - 947164 (-)
Gene ID: C46_contig_120_860
Type: TC
Location: 947200 - 948057 (-)
Gene ID: C46_contig_120_861
Type: TC
Location: 948071 - 948949 (-)
Gene ID: C46_contig_120_862
Type: STP
Location: 949073 - 950308 (-)
Gene ID: C46_contig_120_863
Type: TC
Location: 950582 - 952426 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C46_contig_120_858 vegan > omnivore 1.27461 0.00454
C46_contig_120_861 vegan > omnivore 1.12005 0.00454

🧭 Explore Read Mapping of CGC

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