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Cluster: C46.bin_3_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C46_contig_120 C46_contig_120_817 886868 888442 + CBM91 | GH43_12
NULL(UNKNOWN) C46_contig_120 C46_contig_120_818 888629 889699 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme C46_contig_120 C46_contig_120_819 889785 891905 - GH3
TF C46_contig_120 C46_contig_120_820 891986 893545 - HTH_AraC | HTH_AraC
TC C46_contig_120 C46_contig_120_821 893538 895325 - 8.A.59.2.1
TC C46_contig_120 C46_contig_120_822 895448 896296 - 3.A.1.1.41
TC C46_contig_120 C46_contig_120_823 896300 897202 - 3.A.1.1.7
Gene ID: C46_contig_120_817
Type: CAZyme
Location: 886868 - 888442 (+)
Gene ID: C46_contig_120_818
Type:
Location: 888629 - 889699 (-)
Gene ID: C46_contig_120_819
Type: CAZyme
Location: 889785 - 891905 (-)
Gene ID: C46_contig_120_820
Type: TF
Location: 891986 - 893545 (-)
Gene ID: C46_contig_120_821
Type: TC
Location: 893538 - 895325 (-)
Gene ID: C46_contig_120_822
Type: TC
Location: 895448 - 896296 (-)
Gene ID: C46_contig_120_823
Type: TC
Location: 896300 - 897202 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C46_contig_120_817 vegetarian > vegan 1.14636 0.01232
C46_contig_120_823 vegan > omnivore 1.24090 0.00454

🧭 Explore Read Mapping of CGC

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