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Cluster: C46.bin_3_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C46_contig_120 C46_contig_120_667 721469 722296 + CE4
TC C46_contig_120 C46_contig_120_668 722658 723650 - 3.A.1.3.10
TC C46_contig_120 C46_contig_120_669 723945 724700 - 3.A.1.3.15
TC C46_contig_120 C46_contig_120_670 724722 725399 - 3.A.1.3.25
TC C46_contig_120 C46_contig_120_671 725380 726039 - 3.A.1.3.23
pfam C46_contig_120 C46_contig_120_672 726218 726838 - Lipase_GDSL | Lipase_GDSL_2
TF C46_contig_120 C46_contig_120_673 727084 727851 - HTH_AraC | HTH_AraC
CAZyme C46_contig_120 C46_contig_120_674 728148 730433 + GH3
Gene ID: C46_contig_120_667
Type: CAZyme
Location: 721469 - 722296 (+)
Gene ID: C46_contig_120_668
Type: TC
Location: 722658 - 723650 (-)
Gene ID: C46_contig_120_669
Type: TC
Location: 723945 - 724700 (-)
Gene ID: C46_contig_120_670
Type: TC
Location: 724722 - 725399 (-)
Gene ID: C46_contig_120_671
Type: TC
Location: 725380 - 726039 (-)
Gene ID: C46_contig_120_672
Type: pfam
Location: 726218 - 726838 (-)
Gene ID: C46_contig_120_673
Type: TF
Location: 727084 - 727851 (-)
Gene ID: C46_contig_120_674
Type: CAZyme
Location: 728148 - 730433 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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