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Cluster: C46.bin_3_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C46_contig_388 C46_contig_388_161 165837 166964 - 3.A.11.1.1
NULL(UNKNOWN) C46_contig_388 C46_contig_388_162 167120 167638 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme C46_contig_388 C46_contig_388_163 167999 169747 + GH13_20
pfam C46_contig_388 C46_contig_388_164 169965 170339 + Ribonuc_L-PSP
STP C46_contig_388 C46_contig_388_165 170516 171943 + AAA
TC C46_contig_388 C46_contig_388_166 172040 172402 + 9.B.55.2.1
Gene ID: C46_contig_388_161
Type: TC
Location: 165837 - 166964 (-)
Gene ID: C46_contig_388_162
Type:
Location: 167120 - 167638 (-)
Gene ID: C46_contig_388_163
Type: CAZyme
Location: 167999 - 169747 (+)
Gene ID: C46_contig_388_164
Type: pfam
Location: 169965 - 170339 (+)
Gene ID: C46_contig_388_165
Type: STP
Location: 170516 - 171943 (+)
Gene ID: C46_contig_388_166
Type: TC
Location: 172040 - 172402 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C46_contig_388_162 vegan > omnivore 1.55688 0.00454

🧭 Explore Read Mapping of CGC

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