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Cluster: C46.bin_3_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C46_contig_254 C46_contig_254_1597 1736236 1738140 + 4.A.1.2.12
CAZyme C46_contig_254 C46_contig_254_1598 1738137 1739576 + GH32
pfam C46_contig_254 C46_contig_254_1599 1739859 1740104 + GIY-YIG
pfam C46_contig_254 C46_contig_254_1600 1740133 1741104 + Choline_bind_1 | Choline_bind_1 | Choline_bind_3
TC C46_contig_254 C46_contig_254_1601 1741225 1741887 - 1.C.113.1.3
Gene ID: C46_contig_254_1597
Type: TC
Location: 1736236 - 1738140 (+)
Gene ID: C46_contig_254_1598
Type: CAZyme
Location: 1738137 - 1739576 (+)
Gene ID: C46_contig_254_1599
Type: pfam
Location: 1739859 - 1740104 (+)
Gene ID: C46_contig_254_1600
Type: pfam
Location: 1740133 - 1741104 (+)
Gene ID: C46_contig_254_1601
Type: TC
Location: 1741225 - 1741887 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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