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Cluster: C46.bin_3_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C46_contig_254 C46_contig_254_1460 1570258 1572267 - GH42
CAZyme C46_contig_254 C46_contig_254_1461 1572283 1574358 - GH3
TC C46_contig_254 C46_contig_254_1462 1574403 1575482 - 3.A.1.2.3
TC C46_contig_254 C46_contig_254_1463 1575451 1576944 - 3.A.1.2.3
TC C46_contig_254 C46_contig_254_1464 1577020 1578075 - 3.A.1.2.3
TC C46_contig_254 C46_contig_254_1465 1578266 1579690 - 3.A.1.2.20
TC C46_contig_254 C46_contig_254_1466 1579687 1580721 - 8.A.59.2.1
Gene ID: C46_contig_254_1460
Type: CAZyme
Location: 1570258 - 1572267 (-)
Gene ID: C46_contig_254_1461
Type: CAZyme
Location: 1572283 - 1574358 (-)
Gene ID: C46_contig_254_1462
Type: TC
Location: 1574403 - 1575482 (-)
Gene ID: C46_contig_254_1463
Type: TC
Location: 1575451 - 1576944 (-)
Gene ID: C46_contig_254_1464
Type: TC
Location: 1577020 - 1578075 (-)
Gene ID: C46_contig_254_1465
Type: TC
Location: 1578266 - 1579690 (-)
Gene ID: C46_contig_254_1466
Type: TC
Location: 1579687 - 1580721 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C46_contig_254_1465 vegan > omnivore 1.11273 0.00454

🧭 Explore Read Mapping of CGC

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