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Cluster: C46.bin_3_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C46_contig_254 C46_contig_254_1324 1426103 1427326 + 2.A.23.1.6
CAZyme C46_contig_254 C46_contig_254_1325 1427493 1428884 - GH32
TC C46_contig_254 C46_contig_254_1326 1429003 1429842 - 3.A.1.1.41
TC C46_contig_254 C46_contig_254_1327 1429839 1430723 - 3.A.1.1.20
STP C46_contig_254 C46_contig_254_1328 1430798 1432096 - SBP_bac_1
TF C46_contig_254 C46_contig_254_1329 1432324 1433937 - HTH_AraC | HTH_AraC
TC C46_contig_254 C46_contig_254_1330 1433937 1435769 - 9.B.33.1.1
STP C46_contig_254 C46_contig_254_1331 1435941 1436375 - Glyoxalase
pfam C46_contig_254 C46_contig_254_1332 1437410 1437964 + DctQ
TC C46_contig_254 C46_contig_254_1333 1437965 1441297 + 2.A.56.1.1
pfam C46_contig_254 C46_contig_254_1334 1441783 1442790 - cobW
TC C46_contig_254 C46_contig_254_1335 1442970 1444853 - 3.A.1.135.5
TC C46_contig_254 C46_contig_254_1336 1444846 1446579 - 3.A.1.135.5
Gene ID: C46_contig_254_1324
Type: TC
Location: 1426103 - 1427326 (+)
Gene ID: C46_contig_254_1325
Type: CAZyme
Location: 1427493 - 1428884 (-)
Gene ID: C46_contig_254_1326
Type: TC
Location: 1429003 - 1429842 (-)
Gene ID: C46_contig_254_1327
Type: TC
Location: 1429839 - 1430723 (-)
Gene ID: C46_contig_254_1328
Type: STP
Location: 1430798 - 1432096 (-)
Gene ID: C46_contig_254_1329
Type: TF
Location: 1432324 - 1433937 (-)
Gene ID: C46_contig_254_1330
Type: TC
Location: 1433937 - 1435769 (-)
Gene ID: C46_contig_254_1331
Type: STP
Location: 1435941 - 1436375 (-)
Gene ID: C46_contig_254_1332
Type: pfam
Location: 1437410 - 1437964 (+)
Gene ID: C46_contig_254_1333
Type: TC
Location: 1437965 - 1441297 (+)
Gene ID: C46_contig_254_1334
Type: pfam
Location: 1441783 - 1442790 (-)
Gene ID: C46_contig_254_1335
Type: TC
Location: 1442970 - 1444853 (-)
Gene ID: C46_contig_254_1336
Type: TC
Location: 1444846 - 1446579 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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