Cluster: C46.bin_3_CGC17
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 3
- Substrate:
- Genome ID: C46.bin_3
- CGC Family ID: CGCFAM_00993
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C46_contig_254 | C46_contig_254_1300 | 1393349 | 1395154 | - | 8.A.59.2.1 |
| pfam | C46_contig_254 | C46_contig_254_1301 | 1395566 | 1396804 | - | GHMP_kinases_N | GalKase_gal_bdg |
| TF | C46_contig_254 | C46_contig_254_1302 | 1397208 | 1398104 | + | HTH_AraC |
| CAZyme | C46_contig_254 | C46_contig_254_1303 | 1398385 | 1400442 | - | GH42 |
| TC | C46_contig_254 | C46_contig_254_1304 | 1400465 | 1402252 | - | 8.A.59.2.1 |
| TF | C46_contig_254 | C46_contig_254_1305 | 1402254 | 1403084 | - | HTH_AraC | HTH_AraC |
| TC | C46_contig_254 | C46_contig_254_1306 | 1403160 | 1403996 | - | 3.A.1.1.47 |
| TC | C46_contig_254 | C46_contig_254_1307 | 1404010 | 1404888 | - | 3.A.1.1.7 |
| STP | C46_contig_254 | C46_contig_254_1308 | 1404962 | 1406272 | - | SBP_bac_1 |
| CAZyme | C46_contig_254 | C46_contig_254_1309 | 1406519 | 1408597 | - | GH42 |
| TF | C46_contig_254 | C46_contig_254_1310 | 1408710 | 1409975 | - | HTH_AraC | HTH_AraC |
| CAZyme | C46_contig_254 | C46_contig_254_1311 | 1410226 | 1412223 | - | GH31_4 |
| TC | C46_contig_254 | C46_contig_254_1312 | 1412248 | 1413084 | - | 3.A.1.1.25 |
| TC | C46_contig_254 | C46_contig_254_1313 | 1413105 | 1414001 | - | 3.A.1.1.7 |
| STP | C46_contig_254 | C46_contig_254_1314 | 1414104 | 1415321 | - | SBP_bac_1 |
| TF | C46_contig_254 | C46_contig_254_1315 | 1415423 | 1416145 | - | HTH_AraC | HTH_AraC |
| TC | C46_contig_254 | C46_contig_254_1316 | 1416160 | 1417953 | - | 8.A.59.2.1 |
Gene ID: C46_contig_254_1300
Type: TC
Location: 1393349 - 1395154 (-)
Type: TC
Location: 1393349 - 1395154 (-)
Gene ID: C46_contig_254_1301
Type: pfam
Location: 1395566 - 1396804 (-)
Type: pfam
Location: 1395566 - 1396804 (-)
Gene ID: C46_contig_254_1302
Type: TF
Location: 1397208 - 1398104 (+)
Type: TF
Location: 1397208 - 1398104 (+)
Gene ID: C46_contig_254_1303
Type: CAZyme
Location: 1398385 - 1400442 (-)
Type: CAZyme
Location: 1398385 - 1400442 (-)
Gene ID: C46_contig_254_1304
Type: TC
Location: 1400465 - 1402252 (-)
Type: TC
Location: 1400465 - 1402252 (-)
Gene ID: C46_contig_254_1305
Type: TF
Location: 1402254 - 1403084 (-)
Type: TF
Location: 1402254 - 1403084 (-)
Gene ID: C46_contig_254_1306
Type: TC
Location: 1403160 - 1403996 (-)
Type: TC
Location: 1403160 - 1403996 (-)
Gene ID: C46_contig_254_1307
Type: TC
Location: 1404010 - 1404888 (-)
Type: TC
Location: 1404010 - 1404888 (-)
Gene ID: C46_contig_254_1308
Type: STP
Location: 1404962 - 1406272 (-)
Type: STP
Location: 1404962 - 1406272 (-)
Gene ID: C46_contig_254_1309
Type: CAZyme
Location: 1406519 - 1408597 (-)
Type: CAZyme
Location: 1406519 - 1408597 (-)
Gene ID: C46_contig_254_1310
Type: TF
Location: 1408710 - 1409975 (-)
Type: TF
Location: 1408710 - 1409975 (-)
Gene ID: C46_contig_254_1311
Type: CAZyme
Location: 1410226 - 1412223 (-)
Type: CAZyme
Location: 1410226 - 1412223 (-)
Gene ID: C46_contig_254_1312
Type: TC
Location: 1412248 - 1413084 (-)
Type: TC
Location: 1412248 - 1413084 (-)
Gene ID: C46_contig_254_1313
Type: TC
Location: 1413105 - 1414001 (-)
Type: TC
Location: 1413105 - 1414001 (-)
Gene ID: C46_contig_254_1314
Type: STP
Location: 1414104 - 1415321 (-)
Type: STP
Location: 1414104 - 1415321 (-)
Gene ID: C46_contig_254_1315
Type: TF
Location: 1415423 - 1416145 (-)
Type: TF
Location: 1415423 - 1416145 (-)
Gene ID: C46_contig_254_1316
Type: TC
Location: 1416160 - 1417953 (-)
Type: TC
Location: 1416160 - 1417953 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Blautia_A
Species
Blautia_A wexlerae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C46_contig_254_1303 | vegan > omnivore | 1.05278 | 0.00454 |
| C46_contig_254_1304 | vegan > omnivore | 1.08371 | 0.00454 |
| C46_contig_254_1305 | vegan > omnivore | 1.70323 | 0.00454 |
| C46_contig_254_1305 | vegetarian > omnivore | 2.66247 | 0.03459 |
| C46_contig_254_1307 | vegan > omnivore | 1.19200 | 0.00454 |