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Cluster: C46.bin_3_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C46_contig_254 C46_contig_254_169 163161 164681 - 2.A.118.1.8
pfam C46_contig_254 C46_contig_254_170 165033 166022 - RelA_SpoT
TC C46_contig_254 C46_contig_254_171 166215 166790 - 3.A.1.134.7
pfam C46_contig_254 C46_contig_254_172 166862 167653 - BPD_transp_1
STP C46_contig_254 C46_contig_254_173 167628 168602 - SBP_bac_3
CAZyme C46_contig_254 C46_contig_254_174 168693 169541 - GH73
Gene ID: C46_contig_254_169
Type: TC
Location: 163161 - 164681 (-)
Gene ID: C46_contig_254_170
Type: pfam
Location: 165033 - 166022 (-)
Gene ID: C46_contig_254_171
Type: TC
Location: 166215 - 166790 (-)
Gene ID: C46_contig_254_172
Type: pfam
Location: 166862 - 167653 (-)
Gene ID: C46_contig_254_173
Type: STP
Location: 167628 - 168602 (-)
Gene ID: C46_contig_254_174
Type: CAZyme
Location: 168693 - 169541 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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