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Cluster: C41.bin_11_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C41_contig_43 C41_contig_43_361 420518 421900 + GH29
CAZyme C41_contig_43 C41_contig_43_362 422081 424384 + GH95
pfam C41_contig_43 C41_contig_43_363 424834 425514 - AIM24
TF C41_contig_43 C41_contig_43_364 425598 427172 - HTH_AraC | HTH_AraC
TC C41_contig_43 C41_contig_43_365 427169 428965 - 8.A.59.2.1
STP C41_contig_43 C41_contig_43_366 429213 430508 + SBP_bac_1
TC C41_contig_43 C41_contig_43_367 430597 431478 + 3.A.1.1.34
TC C41_contig_43 C41_contig_43_368 431493 432320 + 3.A.1.1.28
Gene ID: C41_contig_43_361
Type: CAZyme
Location: 420518 - 421900 (+)
Gene ID: C41_contig_43_362
Type: CAZyme
Location: 422081 - 424384 (+)
Gene ID: C41_contig_43_363
Type: pfam
Location: 424834 - 425514 (-)
Gene ID: C41_contig_43_364
Type: TF
Location: 425598 - 427172 (-)
Gene ID: C41_contig_43_365
Type: TC
Location: 427169 - 428965 (-)
Gene ID: C41_contig_43_366
Type: STP
Location: 429213 - 430508 (+)
Gene ID: C41_contig_43_367
Type: TC
Location: 430597 - 431478 (+)
Gene ID: C41_contig_43_368
Type: TC
Location: 431493 - 432320 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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