Cluster: C41.bin_11_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: C41.bin_11
- CGC Family ID: CGCFAM_02313
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C41_contig_43 | C41_contig_43_323 | 371641 | 372594 | + | 3.A.1.1.10 |
| STP | C41_contig_43 | C41_contig_43_324 | 372645 | 374396 | + | SBP_bac_1 |
| TC | C41_contig_43 | C41_contig_43_325 | 374481 | 375383 | + | 3.A.1.1.29 |
| STP | C41_contig_43 | C41_contig_43_326 | 375725 | 376678 | + | PfkB |
| CAZyme | C41_contig_43 | C41_contig_43_327 | 376701 | 378059 | + | GH4 |
Gene ID: C41_contig_43_323
Type: TC
Location: 371641 - 372594 (+)
Type: TC
Location: 371641 - 372594 (+)
Gene ID: C41_contig_43_324
Type: STP
Location: 372645 - 374396 (+)
Type: STP
Location: 372645 - 374396 (+)
Gene ID: C41_contig_43_325
Type: TC
Location: 374481 - 375383 (+)
Type: TC
Location: 374481 - 375383 (+)
Gene ID: C41_contig_43_326
Type: STP
Location: 375725 - 376678 (+)
Type: STP
Location: 375725 - 376678 (+)
Gene ID: C41_contig_43_327
Type: CAZyme
Location: 376701 - 378059 (+)
Type: CAZyme
Location: 376701 - 378059 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oliverpabstia
Species
Oliverpabstia tarda
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C41_contig_43_323 | vegetarian > omnivore | 1.42139 | 0.00782 |
| C41_contig_43_325 | vegan > omnivore | 1.25917 | 0.00924 |