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Cluster: C41.bin_11_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C41_contig_43 C41_contig_43_278 317796 319193 + 3.A.1.1.36
TC C41_contig_43 C41_contig_43_279 319268 320155 + 3.A.1.1.36
TC C41_contig_43 C41_contig_43_280 320157 320984 + 3.A.1.1.36
pfam C41_contig_43 C41_contig_43_281 320990 321997 + Acyl_transf_3 | HGSNAT_cat
CAZyme C41_contig_43 C41_contig_43_282 321994 323793 + GH2
pfam C41_contig_43 C41_contig_43_283 324230 325180 + Ldh_1_N | TrkA_N | Ldh_1_C
TC C41_contig_43 C41_contig_43_284 325261 326085 + 3.D.10.1.4
Gene ID: C41_contig_43_278
Type: TC
Location: 317796 - 319193 (+)
Gene ID: C41_contig_43_279
Type: TC
Location: 319268 - 320155 (+)
Gene ID: C41_contig_43_280
Type: TC
Location: 320157 - 320984 (+)
Gene ID: C41_contig_43_281
Type: pfam
Location: 320990 - 321997 (+)
Gene ID: C41_contig_43_282
Type: CAZyme
Location: 321994 - 323793 (+)
Gene ID: C41_contig_43_283
Type: pfam
Location: 324230 - 325180 (+)
Gene ID: C41_contig_43_284
Type: TC
Location: 325261 - 326085 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C41_contig_43_282 vegetarian > omnivore 1.27646 0.00782
C41_contig_43_284 vegan > omnivore 1.25219 0.00924

🧭 Explore Read Mapping of CGC

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