Cluster: C41.bin_11_CGC48
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: C41.bin_11
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C41_contig_198 | C41_contig_198_158 | 156424 | 157050 | + | 3.A.1.124.1 |
| TC | C41_contig_198 | C41_contig_198_159 | 157215 | 158585 | - | 2.A.66.1.33 |
| TF | C41_contig_198 | C41_contig_198_160 | 159065 | 159919 | + | HTH_6 |
| CAZyme | C41_contig_198 | C41_contig_198_161 | 159916 | 161034 | + | CE9 |
Gene ID: C41_contig_198_158
Type: TC
Location: 156424 - 157050 (+)
Type: TC
Location: 156424 - 157050 (+)
Gene ID: C41_contig_198_159
Type: TC
Location: 157215 - 158585 (-)
Type: TC
Location: 157215 - 158585 (-)
Gene ID: C41_contig_198_160
Type: TF
Location: 159065 - 159919 (+)
Type: TF
Location: 159065 - 159919 (+)
Gene ID: C41_contig_198_161
Type: CAZyme
Location: 159916 - 161034 (+)
Type: CAZyme
Location: 159916 - 161034 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oliverpabstia
Species
Oliverpabstia tarda
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C41_contig_198_159 | vegan > omnivore | 1.23645 | 0.00924 |
| C41_contig_198_159 | vegetarian > omnivore | 1.36339 | 0.00782 |