Cluster: C41.bin_11_CGC46
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: C41.bin_11
- CGC Family ID: CGCFAM_00046
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C41_contig_198 | C41_contig_198_131 | 117935 | 119113 | + | 2.A.120.1.3 |
| peptidase | C41_contig_198 | C41_contig_198_132 | 119325 | 120896 | - | S11.UPW |
| CAZyme | C41_contig_198 | C41_contig_198_133 | 121208 | 123427 | + | GH3 |
| pfam | C41_contig_198 | C41_contig_198_134 | 123780 | 126935 | + | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | DUF5915 |
| CAZyme | C41_contig_198 | C41_contig_198_135 | 127092 | 129554 | + | GT35 |
Gene ID: C41_contig_198_131
Type: TC
Location: 117935 - 119113 (+)
Type: TC
Location: 117935 - 119113 (+)
Gene ID: C41_contig_198_132
Type: peptidase
Location: 119325 - 120896 (-)
Type: peptidase
Location: 119325 - 120896 (-)
Gene ID: C41_contig_198_133
Type: CAZyme
Location: 121208 - 123427 (+)
Type: CAZyme
Location: 121208 - 123427 (+)
Gene ID: C41_contig_198_134
Type: pfam
Location: 123780 - 126935 (+)
Type: pfam
Location: 123780 - 126935 (+)
Gene ID: C41_contig_198_135
Type: CAZyme
Location: 127092 - 129554 (+)
Type: CAZyme
Location: 127092 - 129554 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oliverpabstia
Species
Oliverpabstia tarda
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.