Cluster: C41.bin_11_CGC44
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: C41.bin_11
- CGC Family ID: CGCFAM_01183
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C41_contig_43 | C41_contig_43_3064 | 3409442 | 3410410 | - | GT2 |
| NULL(UNKNOWN) | C41_contig_43 | C41_contig_43_3065 | 3410429 | 3411505 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C41_contig_43 | C41_contig_43_3066 | 3411533 | 3412984 | - | 2.A.66.2.22 |
| CAZyme | C41_contig_43 | C41_contig_43_3067 | 3413314 | 3414294 | - | GT2 |
| pfam | C41_contig_43 | C41_contig_43_3068 | 3414291 | 3415679 | - | O-antigen_lig |
| CAZyme | C41_contig_43 | C41_contig_43_3069 | 3415782 | 3416918 | + | GT4 |
| pfam | C41_contig_43 | C41_contig_43_3070 | 3416952 | 3418061 | - | Epimerase_2 |
| CAZyme | C41_contig_43 | C41_contig_43_3071 | 3418058 | 3418780 | - | GT26 |
| TC | C41_contig_43 | C41_contig_43_3072 | 3418781 | 3420148 | - | 9.B.18.1.3 |
Gene ID: C41_contig_43_3064
Type: CAZyme
Location: 3409442 - 3410410 (-)
Type: CAZyme
Location: 3409442 - 3410410 (-)
Gene ID: C41_contig_43_3065
Type:
Location: 3410429 - 3411505 (-)
Type:
Location: 3410429 - 3411505 (-)
Gene ID: C41_contig_43_3066
Type: TC
Location: 3411533 - 3412984 (-)
Type: TC
Location: 3411533 - 3412984 (-)
Gene ID: C41_contig_43_3067
Type: CAZyme
Location: 3413314 - 3414294 (-)
Type: CAZyme
Location: 3413314 - 3414294 (-)
Gene ID: C41_contig_43_3068
Type: pfam
Location: 3414291 - 3415679 (-)
Type: pfam
Location: 3414291 - 3415679 (-)
Gene ID: C41_contig_43_3069
Type: CAZyme
Location: 3415782 - 3416918 (+)
Type: CAZyme
Location: 3415782 - 3416918 (+)
Gene ID: C41_contig_43_3070
Type: pfam
Location: 3416952 - 3418061 (-)
Type: pfam
Location: 3416952 - 3418061 (-)
Gene ID: C41_contig_43_3071
Type: CAZyme
Location: 3418058 - 3418780 (-)
Type: CAZyme
Location: 3418058 - 3418780 (-)
Gene ID: C41_contig_43_3072
Type: TC
Location: 3418781 - 3420148 (-)
Type: TC
Location: 3418781 - 3420148 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oliverpabstia
Species
Oliverpabstia tarda
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.