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Cluster: C41.bin_11_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C41_contig_43 C41_contig_43_2937 3281460 3282782 - 2.A.22.5.2
peptidase C41_contig_43 C41_contig_43_2938 3282812 3283996 - S12.UPW
TC C41_contig_43 C41_contig_43_2939 3284257 3285510 - 2.A.39.1.1
NULL(UNKNOWN) C41_contig_43 C41_contig_43_2940 3285588 3286676 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) C41_contig_43 C41_contig_43_2941 3287063 3287296 + NULL(UNKNOWN)
[View Structural Homologs]
TC C41_contig_43 C41_contig_43_2942 3287522 3288316 + 2.A.79.1.5
pfam C41_contig_43 C41_contig_43_2943 3288452 3288892 + ThrE | ThrE_2
CAZyme C41_contig_43 C41_contig_43_2944 3289087 3291336 - GH31_3
TF C41_contig_43 C41_contig_43_2945 3291622 3292290 + MerR
pfam C41_contig_43 C41_contig_43_2946 3292232 3293383 + OrfB_IS605 | Cas12f1-like_TNB | HTH_OrfB_IS605
CAZyme C41_contig_43 C41_contig_43_2947 3293579 3294784 + GH109
NULL(UNKNOWN) C41_contig_43 C41_contig_43_2948 3295051 3295494 - NULL(UNKNOWN)
[View Structural Homologs]
pfam C41_contig_43 C41_contig_43_2949 3295661 3296359 - IMPDH | NanE
TC C41_contig_43 C41_contig_43_2950 3296589 3297530 - 2.A.66.1.28
Gene ID: C41_contig_43_2937
Type: TC
Location: 3281460 - 3282782 (-)
Gene ID: C41_contig_43_2938
Type: peptidase
Location: 3282812 - 3283996 (-)
Gene ID: C41_contig_43_2939
Type: TC
Location: 3284257 - 3285510 (-)
Gene ID: C41_contig_43_2940
Type:
Location: 3285588 - 3286676 (-)
Gene ID: C41_contig_43_2941
Type:
Location: 3287063 - 3287296 (+)
Gene ID: C41_contig_43_2942
Type: TC
Location: 3287522 - 3288316 (+)
Gene ID: C41_contig_43_2943
Type: pfam
Location: 3288452 - 3288892 (+)
Gene ID: C41_contig_43_2944
Type: CAZyme
Location: 3289087 - 3291336 (-)
Gene ID: C41_contig_43_2945
Type: TF
Location: 3291622 - 3292290 (+)
Gene ID: C41_contig_43_2946
Type: pfam
Location: 3292232 - 3293383 (+)
Gene ID: C41_contig_43_2947
Type: CAZyme
Location: 3293579 - 3294784 (+)
Gene ID: C41_contig_43_2948
Type:
Location: 3295051 - 3295494 (-)
Gene ID: C41_contig_43_2949
Type: pfam
Location: 3295661 - 3296359 (-)
Gene ID: C41_contig_43_2950
Type: TC
Location: 3296589 - 3297530 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C41_contig_43_2944 vegetarian > vegan 1.01225 0.00229

🧭 Explore Read Mapping of CGC

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