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Cluster: C41.bin_11_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C41_contig_43 C41_contig_43_2628 2923904 2925526 - GH36
TF C41_contig_43 C41_contig_43_2629 2925626 2926537 - HTH_AraC | HTH_AraC
CAZyme C41_contig_43 C41_contig_43_2630 2926543 2928831 - GH36
TC C41_contig_43 C41_contig_43_2631 2928905 2929744 - 3.A.1.1.36
TC C41_contig_43 C41_contig_43_2632 2929760 2930659 - 3.A.1.1.11
STP C41_contig_43 C41_contig_43_2633 2930748 2932076 - SBP_bac_1
TC C41_contig_43 C41_contig_43_2634 2932558 2933223 + 9.B.28.1.2
Gene ID: C41_contig_43_2628
Type: CAZyme
Location: 2923904 - 2925526 (-)
Gene ID: C41_contig_43_2629
Type: TF
Location: 2925626 - 2926537 (-)
Gene ID: C41_contig_43_2630
Type: CAZyme
Location: 2926543 - 2928831 (-)
Gene ID: C41_contig_43_2631
Type: TC
Location: 2928905 - 2929744 (-)
Gene ID: C41_contig_43_2632
Type: TC
Location: 2929760 - 2930659 (-)
Gene ID: C41_contig_43_2633
Type: STP
Location: 2930748 - 2932076 (-)
Gene ID: C41_contig_43_2634
Type: TC
Location: 2932558 - 2933223 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C41_contig_43_2631 vegan > omnivore 1.38248 0.00924
C41_contig_43_2631 vegetarian > omnivore 1.07408 0.00782
C41_contig_43_2633 vegan > omnivore 1.38132 0.00924

🧭 Explore Read Mapping of CGC

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