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Cluster: C41.bin_11_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C41_contig_43 C41_contig_43_2611 2901968 2904499 - GH2
pfam C41_contig_43 C41_contig_43_2612 2905274 2905447 - DUF4250
TC C41_contig_43 C41_contig_43_2613 2905460 2908048 - 3.A.9.1.2
pfam C41_contig_43 C41_contig_43_2614 2908759 2909937 - Peptidase_C39 | Peptidase_C70 | Peptidase_C39_2
TC C41_contig_43 C41_contig_43_2615 2910035 2910601 - 9.B.105.1.3
TC C41_contig_43 C41_contig_43_2616 2910649 2911536 - 2.A.115.1.1
Gene ID: C41_contig_43_2611
Type: CAZyme
Location: 2901968 - 2904499 (-)
Gene ID: C41_contig_43_2612
Type: pfam
Location: 2905274 - 2905447 (-)
Gene ID: C41_contig_43_2613
Type: TC
Location: 2905460 - 2908048 (-)
Gene ID: C41_contig_43_2614
Type: pfam
Location: 2908759 - 2909937 (-)
Gene ID: C41_contig_43_2615
Type: TC
Location: 2910035 - 2910601 (-)
Gene ID: C41_contig_43_2616
Type: TC
Location: 2910649 - 2911536 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C41_contig_43_2611 vegan > omnivore 1.74169 0.00924
C41_contig_43_2611 vegetarian > omnivore 1.07404 0.00782
C41_contig_43_2612 vegan > omnivore 2.27296 0.00924

🧭 Explore Read Mapping of CGC

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