Cluster: C41.bin_11_CGC34
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: C41.bin_11
- CGC Family ID: CGCFAM_00010
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C41_contig_43 | C41_contig_43_2536 | 2839278 | 2839907 | - | 3.A.11.1.4 |
| pfam | C41_contig_43 | C41_contig_43_2537 | 2840011 | 2840442 | - | EamA | DMT_YdcZ |
| CAZyme | C41_contig_43 | C41_contig_43_2538 | 2840523 | 2842790 | - | GT35 |
| TF | C41_contig_43 | C41_contig_43_2539 | 2842823 | 2843851 | - | LacI |
| CAZyme | C41_contig_43 | C41_contig_43_2540 | 2843872 | 2845347 | - | GH77 |
Gene ID: C41_contig_43_2536
Type: TC
Location: 2839278 - 2839907 (-)
Type: TC
Location: 2839278 - 2839907 (-)
Gene ID: C41_contig_43_2537
Type: pfam
Location: 2840011 - 2840442 (-)
Type: pfam
Location: 2840011 - 2840442 (-)
Gene ID: C41_contig_43_2538
Type: CAZyme
Location: 2840523 - 2842790 (-)
Type: CAZyme
Location: 2840523 - 2842790 (-)
Gene ID: C41_contig_43_2539
Type: TF
Location: 2842823 - 2843851 (-)
Type: TF
Location: 2842823 - 2843851 (-)
Gene ID: C41_contig_43_2540
Type: CAZyme
Location: 2843872 - 2845347 (-)
Type: CAZyme
Location: 2843872 - 2845347 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oliverpabstia
Species
Oliverpabstia tarda
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C41_contig_43_2536 | vegan > omnivore | 2.11289 | 0.00924 |