Cluster: C41.bin_11_CGC33
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: C41.bin_11
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C41_contig_43 | C41_contig_43_2521 | 2817886 | 2818599 | - | 3.A.11.1.4 |
| TC | C41_contig_43 | C41_contig_43_2522 | 2818589 | 2820850 | - | 3.A.7.16.1 |
| TC | C41_contig_43 | C41_contig_43_2523 | 2820854 | 2821894 | - | 1.A.33.1.5 |
| pfam | C41_contig_43 | C41_contig_43_2524 | 2821969 | 2824806 | - | UvrA_DNA-bind | UvrA_inter |
| pfam | C41_contig_43 | C41_contig_43_2525 | 2825014 | 2826147 | - | Radical_SAM | HemN_C |
| CAZyme | C41_contig_43 | C41_contig_43_2526 | 2826240 | 2827559 | - | GT2 |
Gene ID: C41_contig_43_2521
Type: TC
Location: 2817886 - 2818599 (-)
Type: TC
Location: 2817886 - 2818599 (-)
Gene ID: C41_contig_43_2522
Type: TC
Location: 2818589 - 2820850 (-)
Type: TC
Location: 2818589 - 2820850 (-)
Gene ID: C41_contig_43_2523
Type: TC
Location: 2820854 - 2821894 (-)
Type: TC
Location: 2820854 - 2821894 (-)
Gene ID: C41_contig_43_2524
Type: pfam
Location: 2821969 - 2824806 (-)
Type: pfam
Location: 2821969 - 2824806 (-)
Gene ID: C41_contig_43_2525
Type: pfam
Location: 2825014 - 2826147 (-)
Type: pfam
Location: 2825014 - 2826147 (-)
Gene ID: C41_contig_43_2526
Type: CAZyme
Location: 2826240 - 2827559 (-)
Type: CAZyme
Location: 2826240 - 2827559 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oliverpabstia
Species
Oliverpabstia tarda
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C41_contig_43_2522 | vegetarian > omnivore | 1.36830 | 0.00782 |
| C41_contig_43_2523 | vegetarian > omnivore | 1.06932 | 0.00782 |
| C41_contig_43_2526 | vegetarian > vegan | 2.19361 | 0.00229 |