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Cluster: C41.bin_11_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C41_contig_43 C41_contig_43_191 212057 212848 + 3.A.1.5.11
NULL(UNKNOWN) C41_contig_43 C41_contig_43_192 212852 213286 + NULL(UNKNOWN)
[View Structural Homologs]
pfam C41_contig_43 C41_contig_43_193 214116 214442 - DDE_Tnp_1_4
CAZyme C41_contig_43 C41_contig_43_194 215155 217167 + GH42
TC C41_contig_43 C41_contig_43_195 217509 219134 + 3.A.1.5.28
TC C41_contig_43 C41_contig_43_196 219200 220216 + 3.A.1.5.25
TC C41_contig_43 C41_contig_43_197 220206 221030 + 3.A.1.5.19
TC C41_contig_43 C41_contig_43_198 221020 222027 + 3.A.1.5.20
TC C41_contig_43 C41_contig_43_199 222020 222910 + 3.A.1.5.20
pfam C41_contig_43 C41_contig_43_200 223049 224221 + ELFV_dehydrog | malic | Malic_M
TF C41_contig_43 C41_contig_43_201 224392 225231 - HTH_AraC | HTH_AraC
CAZyme C41_contig_43 C41_contig_43_202 225853 228018 + GH112
pfam C41_contig_43 C41_contig_43_203 228410 229255 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
TC C41_contig_43 C41_contig_43_204 229255 230538 + 2.A.23.1.5
STP C41_contig_43 C41_contig_43_205 230652 232055 - HisKA
TF C41_contig_43 C41_contig_43_206 232048 232761 - Trans_reg_C
CAZyme C41_contig_43 C41_contig_43_207 233056 233991 + GT2
Gene ID: C41_contig_43_191
Type: TC
Location: 212057 - 212848 (+)
Gene ID: C41_contig_43_192
Type:
Location: 212852 - 213286 (+)
Gene ID: C41_contig_43_193
Type: pfam
Location: 214116 - 214442 (-)
Gene ID: C41_contig_43_194
Type: CAZyme
Location: 215155 - 217167 (+)
Gene ID: C41_contig_43_195
Type: TC
Location: 217509 - 219134 (+)
Gene ID: C41_contig_43_196
Type: TC
Location: 219200 - 220216 (+)
Gene ID: C41_contig_43_197
Type: TC
Location: 220206 - 221030 (+)
Gene ID: C41_contig_43_198
Type: TC
Location: 221020 - 222027 (+)
Gene ID: C41_contig_43_199
Type: TC
Location: 222020 - 222910 (+)
Gene ID: C41_contig_43_200
Type: pfam
Location: 223049 - 224221 (+)
Gene ID: C41_contig_43_201
Type: TF
Location: 224392 - 225231 (-)
Gene ID: C41_contig_43_202
Type: CAZyme
Location: 225853 - 228018 (+)
Gene ID: C41_contig_43_203
Type: pfam
Location: 228410 - 229255 (+)
Gene ID: C41_contig_43_204
Type: TC
Location: 229255 - 230538 (+)
Gene ID: C41_contig_43_205
Type: STP
Location: 230652 - 232055 (-)
Gene ID: C41_contig_43_206
Type: TF
Location: 232048 - 232761 (-)
Gene ID: C41_contig_43_207
Type: CAZyme
Location: 233056 - 233991 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C41_contig_43_198 vegan > omnivore 1.32946 0.00924
C41_contig_43_204 vegetarian > vegan 1.27660 0.00229
C41_contig_43_207 vegetarian > vegan 1.35324 0.00229

🧭 Explore Read Mapping of CGC

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