Cluster: C41.bin_11_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: C41.bin_11
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C41_contig_43 | C41_contig_43_1090 | 1234635 | 1237730 | - | GH2 |
| CAZyme | C41_contig_43 | C41_contig_43_1091 | 1237881 | 1239533 | - | GH13_31 |
| pfam | C41_contig_43 | C41_contig_43_1092 | 1239692 | 1240066 | + | Ribonuc_L-PSP |
| TC | C41_contig_43 | C41_contig_43_1093 | 1240292 | 1241839 | + | 2.A.21.2.3 |
Gene ID: C41_contig_43_1090
Type: CAZyme
Location: 1234635 - 1237730 (-)
Type: CAZyme
Location: 1234635 - 1237730 (-)
Gene ID: C41_contig_43_1091
Type: CAZyme
Location: 1237881 - 1239533 (-)
Type: CAZyme
Location: 1237881 - 1239533 (-)
Gene ID: C41_contig_43_1092
Type: pfam
Location: 1239692 - 1240066 (+)
Type: pfam
Location: 1239692 - 1240066 (+)
Gene ID: C41_contig_43_1093
Type: TC
Location: 1240292 - 1241839 (+)
Type: TC
Location: 1240292 - 1241839 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oliverpabstia
Species
Oliverpabstia tarda
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C41_contig_43_1091 | vegan > omnivore | 1.26241 | 0.00924 |
| C41_contig_43_1092 | vegan > omnivore | 1.72108 | 0.00924 |
| C41_contig_43_1092 | vegetarian > omnivore | 1.41845 | 0.00782 |
| C41_contig_43_1093 | vegetarian > omnivore | 1.05481 | 0.00782 |