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Cluster: C41.bin_11_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C41_contig_43 C41_contig_43_979 1112059 1112706 + 3.A.1.3.14
TC C41_contig_43 C41_contig_43_980 1112717 1113475 + 3.A.1.3.5
pfam C41_contig_43 C41_contig_43_981 1113588 1115021 + Lyase_1 | ADSL_C
TF C41_contig_43 C41_contig_43_982 1115188 1116237 - LacI
CAZyme C41_contig_43 C41_contig_43_983 1116549 1117862 + GH32
pfam C41_contig_43 C41_contig_43_984 1117998 1119272 + Adenylsucc_synt
STP C41_contig_43 C41_contig_43_985 1119572 1120387 + PfkB
TC C41_contig_43 C41_contig_43_986 1120380 1121549 + 2.A.39.1.3
Gene ID: C41_contig_43_979
Type: TC
Location: 1112059 - 1112706 (+)
Gene ID: C41_contig_43_980
Type: TC
Location: 1112717 - 1113475 (+)
Gene ID: C41_contig_43_981
Type: pfam
Location: 1113588 - 1115021 (+)
Gene ID: C41_contig_43_982
Type: TF
Location: 1115188 - 1116237 (-)
Gene ID: C41_contig_43_983
Type: CAZyme
Location: 1116549 - 1117862 (+)
Gene ID: C41_contig_43_984
Type: pfam
Location: 1117998 - 1119272 (+)
Gene ID: C41_contig_43_985
Type: STP
Location: 1119572 - 1120387 (+)
Gene ID: C41_contig_43_986
Type: TC
Location: 1120380 - 1121549 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C41_contig_43_983 vegetarian > omnivore 1.00142 0.00782

🧭 Explore Read Mapping of CGC

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