Cluster: C41.bin_11_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: C41.bin_11
- CGC Family ID: CGCFAM_00039
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C41_contig_43 | C41_contig_43_864 | 947631 | 949448 | + | GT2 | GT2 |
| CAZyme | C41_contig_43 | C41_contig_43_865 | 949462 | 950427 | + | GT2 |
| TC | C41_contig_43 | C41_contig_43_866 | 950655 | 952061 | + | 9.B.18.1.1 |
| pfam | C41_contig_43 | C41_contig_43_867 | 952109 | 953374 | + | LytR_cpsA_psr |
| pfam | C41_contig_43 | C41_contig_43_868 | 953408 | 954559 | + | LytR_cpsA_psr |
| CAZyme | C41_contig_43 | C41_contig_43_869 | 954638 | 955558 | + | GT2 |
Gene ID: C41_contig_43_864
Type: CAZyme
Location: 947631 - 949448 (+)
Type: CAZyme
Location: 947631 - 949448 (+)
Gene ID: C41_contig_43_865
Type: CAZyme
Location: 949462 - 950427 (+)
Type: CAZyme
Location: 949462 - 950427 (+)
Gene ID: C41_contig_43_866
Type: TC
Location: 950655 - 952061 (+)
Type: TC
Location: 950655 - 952061 (+)
Gene ID: C41_contig_43_867
Type: pfam
Location: 952109 - 953374 (+)
Type: pfam
Location: 952109 - 953374 (+)
Gene ID: C41_contig_43_868
Type: pfam
Location: 953408 - 954559 (+)
Type: pfam
Location: 953408 - 954559 (+)
Gene ID: C41_contig_43_869
Type: CAZyme
Location: 954638 - 955558 (+)
Type: CAZyme
Location: 954638 - 955558 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oliverpabstia
Species
Oliverpabstia tarda
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.