Cluster: C41.bin_11_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: C41.bin_11
- CGC Family ID: CGCFAM_00064
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C41_contig_43 | C41_contig_43_849 | 926137 | 927519 | + | 3.A.1.104.1 |
| TC | C41_contig_43 | C41_contig_43_850 | 927544 | 928812 | + | 3.A.1.103.6 |
| CAZyme | C41_contig_43 | C41_contig_43_851 | 928828 | 934500 | + | GT2 | GT4 | GT4 |
| CAZyme | C41_contig_43 | C41_contig_43_852 | 934479 | 936929 | + | GT2 | GT2 |
Gene ID: C41_contig_43_849
Type: TC
Location: 926137 - 927519 (+)
Type: TC
Location: 926137 - 927519 (+)
Gene ID: C41_contig_43_850
Type: TC
Location: 927544 - 928812 (+)
Type: TC
Location: 927544 - 928812 (+)
Gene ID: C41_contig_43_851
Type: CAZyme
Location: 928828 - 934500 (+)
Type: CAZyme
Location: 928828 - 934500 (+)
Gene ID: C41_contig_43_852
Type: CAZyme
Location: 934479 - 936929 (+)
Type: CAZyme
Location: 934479 - 936929 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oliverpabstia
Species
Oliverpabstia tarda
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C41_contig_43_849 | vegan > omnivore | 1.70519 | 0.00924 |
| C41_contig_43_850 | vegan > omnivore | 1.03889 | 0.00924 |