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Cluster: C41.bin_11_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C41_contig_43 C41_contig_43_706 768594 769481 + 3.A.1.1.45
TC C41_contig_43 C41_contig_43_707 769481 770335 + 3.A.1.1.45
TF C41_contig_43 C41_contig_43_708 770630 771658 + LacI
CAZyme C41_contig_43 C41_contig_43_709 771672 773234 + GH13_44
CAZyme C41_contig_43 C41_contig_43_710 773250 774032 + CE1
peptidase C41_contig_43 C41_contig_43_711 774080 774958 + S12.UPW
TC C41_contig_43 C41_contig_43_712 775396 777156 + 9.B.33.1.1
TF C41_contig_43 C41_contig_43_713 777147 778736 + HTH_AraC
STP C41_contig_43 C41_contig_43_714 778915 780246 + SBP_bac_1
TC C41_contig_43 C41_contig_43_715 780275 781159 + 3.A.1.1.34
TC C41_contig_43 C41_contig_43_716 781156 781998 + 3.A.1.1.7
CAZyme C41_contig_43 C41_contig_43_717 782035 783450 + GH32
pfam C41_contig_43 C41_contig_43_718 783545 784672 - ROK
TC C41_contig_43 C41_contig_43_719 784981 786381 + 2.A.22.5.3
TC C41_contig_43 C41_contig_43_720 786519 787850 - 2.A.66.1.13
Gene ID: C41_contig_43_706
Type: TC
Location: 768594 - 769481 (+)
Gene ID: C41_contig_43_707
Type: TC
Location: 769481 - 770335 (+)
Gene ID: C41_contig_43_708
Type: TF
Location: 770630 - 771658 (+)
Gene ID: C41_contig_43_709
Type: CAZyme
Location: 771672 - 773234 (+)
Gene ID: C41_contig_43_710
Type: CAZyme
Location: 773250 - 774032 (+)
Gene ID: C41_contig_43_711
Type: peptidase
Location: 774080 - 774958 (+)
Gene ID: C41_contig_43_712
Type: TC
Location: 775396 - 777156 (+)
Gene ID: C41_contig_43_713
Type: TF
Location: 777147 - 778736 (+)
Gene ID: C41_contig_43_714
Type: STP
Location: 778915 - 780246 (+)
Gene ID: C41_contig_43_715
Type: TC
Location: 780275 - 781159 (+)
Gene ID: C41_contig_43_716
Type: TC
Location: 781156 - 781998 (+)
Gene ID: C41_contig_43_717
Type: CAZyme
Location: 782035 - 783450 (+)
Gene ID: C41_contig_43_718
Type: pfam
Location: 783545 - 784672 (-)
Gene ID: C41_contig_43_719
Type: TC
Location: 784981 - 786381 (+)
Gene ID: C41_contig_43_720
Type: TC
Location: 786519 - 787850 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C41_contig_43_710 vegan > omnivore 1.19812 0.00924
C41_contig_43_712 vegetarian > omnivore 1.54718 0.00782
C41_contig_43_712 vegetarian > vegan 2.23076 0.01764

🧭 Explore Read Mapping of CGC

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