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Cluster: C41.bin_11_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C41_contig_43 C41_contig_43_562 617158 618540 - 2.A.66.1.32
TF C41_contig_43 C41_contig_43_563 618667 619197 + PadR
pfam C41_contig_43 C41_contig_43_564 619447 620073 - ABC2_membrane_5
TC C41_contig_43 C41_contig_43_565 620070 620927 - 3.A.1.149.1
TF C41_contig_43 C41_contig_43_566 620932 621306 - GntR
pfam C41_contig_43 C41_contig_43_567 621473 622378 - TpcC
CAZyme C41_contig_43 C41_contig_43_568 622394 623398 - GH23
NULL(UNKNOWN) C41_contig_43 C41_contig_43_569 623395 625530 - NULL(UNKNOWN)
[View Structural Homologs]
TC C41_contig_43 C41_contig_43_570 625536 627986 - 3.A.7.14.2
Gene ID: C41_contig_43_562
Type: TC
Location: 617158 - 618540 (-)
Gene ID: C41_contig_43_563
Type: TF
Location: 618667 - 619197 (+)
Gene ID: C41_contig_43_564
Type: pfam
Location: 619447 - 620073 (-)
Gene ID: C41_contig_43_565
Type: TC
Location: 620070 - 620927 (-)
Gene ID: C41_contig_43_566
Type: TF
Location: 620932 - 621306 (-)
Gene ID: C41_contig_43_567
Type: pfam
Location: 621473 - 622378 (-)
Gene ID: C41_contig_43_568
Type: CAZyme
Location: 622394 - 623398 (-)
Gene ID: C41_contig_43_569
Type:
Location: 623395 - 625530 (-)
Gene ID: C41_contig_43_570
Type: TC
Location: 625536 - 627986 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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