Cluster: C41.bin_11_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: C41.bin_11
- CGC Family ID: CGCFAM_05238
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C41_contig_43 | C41_contig_43_73 | 81119 | 82054 | + | 3.A.1.1.4 |
| TC | C41_contig_43 | C41_contig_43_74 | 82051 | 82935 | + | 3.A.1.1.34 |
| CAZyme | C41_contig_43 | C41_contig_43_75 | 83136 | 85175 | + | GH42 |
| NULL(UNKNOWN) | C41_contig_43 | C41_contig_43_76 | 85417 | 85602 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C41_contig_43 | C41_contig_43_77 | 85688 | 87844 | + | CBM67 | GH78 |
| CAZyme | C41_contig_43 | C41_contig_43_78 | 88046 | 90100 | + | GH35 |
Gene ID: C41_contig_43_73
Type: TC
Location: 81119 - 82054 (+)
Type: TC
Location: 81119 - 82054 (+)
Gene ID: C41_contig_43_74
Type: TC
Location: 82051 - 82935 (+)
Type: TC
Location: 82051 - 82935 (+)
Gene ID: C41_contig_43_75
Type: CAZyme
Location: 83136 - 85175 (+)
Type: CAZyme
Location: 83136 - 85175 (+)
Gene ID: C41_contig_43_76
Type:
Location: 85417 - 85602 (+)
Type:
Location: 85417 - 85602 (+)
Gene ID: C41_contig_43_77
Type: CAZyme
Location: 85688 - 87844 (+)
Type: CAZyme
Location: 85688 - 87844 (+)
Gene ID: C41_contig_43_78
Type: CAZyme
Location: 88046 - 90100 (+)
Type: CAZyme
Location: 88046 - 90100 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oliverpabstia
Species
Oliverpabstia tarda
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.