Cluster: C38.CMAG_7_CGC24
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: C38.CMAG_7
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C38_contig_1047 | C38_contig_1047_2316 | 2426770 | 2428074 | - | 2.A.45.2.4 |
| TC | C38_contig_1047 | C38_contig_1047_2317 | 2428544 | 2429857 | + | 9.A.40.2.2 |
| CAZyme | C38_contig_1047 | C38_contig_1047_2318 | 2429918 | 2431846 | - | GH13_4 |
| TC | C38_contig_1047 | C38_contig_1047_2319 | 2431985 | 2432800 | - | 3.A.1.24.5 |
| TC | C38_contig_1047 | C38_contig_1047_2320 | 2432830 | 2433483 | - | 3.A.1.24.5 |
| TC | C38_contig_1047 | C38_contig_1047_2321 | 2433452 | 2434513 | - | 3.A.1.24.1 |
| pfam | C38_contig_1047 | C38_contig_1047_2322 | 2434680 | 2435099 | + | YgbA_NO |
| pfam | C38_contig_1047 | C38_contig_1047_2323 | 2435162 | 2435803 | - | Flavin_Reduct | RUBY_RBDX |
| TC | C38_contig_1047 | C38_contig_1047_2324 | 2435961 | 2436836 | + | 2.A.7.3.31 |
| TC | C38_contig_1047 | C38_contig_1047_2325 | 2436876 | 2437676 | - | 3.A.1.3.27 |
| pfam | C38_contig_1047 | C38_contig_1047_2326 | 2437888 | 2438343 | + | DUF441 |
| TC | C38_contig_1047 | C38_contig_1047_2327 | 2438400 | 2438774 | - | 1.A.43.1.11 |
Gene ID: C38_contig_1047_2316
Type: TC
Location: 2426770 - 2428074 (-)
Type: TC
Location: 2426770 - 2428074 (-)
Gene ID: C38_contig_1047_2317
Type: TC
Location: 2428544 - 2429857 (+)
Type: TC
Location: 2428544 - 2429857 (+)
Gene ID: C38_contig_1047_2318
Type: CAZyme
Location: 2429918 - 2431846 (-)
Type: CAZyme
Location: 2429918 - 2431846 (-)
Gene ID: C38_contig_1047_2319
Type: TC
Location: 2431985 - 2432800 (-)
Type: TC
Location: 2431985 - 2432800 (-)
Gene ID: C38_contig_1047_2320
Type: TC
Location: 2432830 - 2433483 (-)
Type: TC
Location: 2432830 - 2433483 (-)
Gene ID: C38_contig_1047_2321
Type: TC
Location: 2433452 - 2434513 (-)
Type: TC
Location: 2433452 - 2434513 (-)
Gene ID: C38_contig_1047_2322
Type: pfam
Location: 2434680 - 2435099 (+)
Type: pfam
Location: 2434680 - 2435099 (+)
Gene ID: C38_contig_1047_2323
Type: pfam
Location: 2435162 - 2435803 (-)
Type: pfam
Location: 2435162 - 2435803 (-)
Gene ID: C38_contig_1047_2324
Type: TC
Location: 2435961 - 2436836 (+)
Type: TC
Location: 2435961 - 2436836 (+)
Gene ID: C38_contig_1047_2325
Type: TC
Location: 2436876 - 2437676 (-)
Type: TC
Location: 2436876 - 2437676 (-)
Gene ID: C38_contig_1047_2326
Type: pfam
Location: 2437888 - 2438343 (+)
Type: pfam
Location: 2437888 - 2438343 (+)
Gene ID: C38_contig_1047_2327
Type: TC
Location: 2438400 - 2438774 (-)
Type: TC
Location: 2438400 - 2438774 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Species
Megamonas funiformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.