Cluster: C38.CMAG_7_CGC19
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: C38.CMAG_7
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C38_contig_1047 | C38_contig_1047_1636 | 1745048 | 1746313 | + | 2.A.103.1.7 |
| peptidase | C38_contig_1047 | C38_contig_1047_1637 | 1746316 | 1747737 | + | X52.001 |
| TC | C38_contig_1047 | C38_contig_1047_1638 | 1747739 | 1749547 | + | 9.B.106.3.1 |
| pfam | C38_contig_1047 | C38_contig_1047_1639 | 1749600 | 1750325 | + | Asn_synthase | QueC |
| TC | C38_contig_1047 | C38_contig_1047_1640 | 1750330 | 1751118 | + | 9.B.10.1.1 |
| CAZyme | C38_contig_1047 | C38_contig_1047_1641 | 1751275 | 1752921 | + | GH36 |
| TF | C38_contig_1047 | C38_contig_1047_1642 | 1752923 | 1753768 | - | HTH_AraC | HTH_AraC |
| pfam | C38_contig_1047 | C38_contig_1047_1643 | 1753950 | 1754813 | + | PHP |
| TC | C38_contig_1047 | C38_contig_1047_1644 | 1754968 | 1755129 | + | 3.D.7.2.3 |
| TC | C38_contig_1047 | C38_contig_1047_1645 | 1755221 | 1756006 | + | 3.A.1.15.5 |
| TC | C38_contig_1047 | C38_contig_1047_1646 | 1756006 | 1756851 | + | 3.A.1.15.14 |
Gene ID: C38_contig_1047_1636
Type: TC
Location: 1745048 - 1746313 (+)
Type: TC
Location: 1745048 - 1746313 (+)
Gene ID: C38_contig_1047_1637
Type: peptidase
Location: 1746316 - 1747737 (+)
Type: peptidase
Location: 1746316 - 1747737 (+)
Gene ID: C38_contig_1047_1638
Type: TC
Location: 1747739 - 1749547 (+)
Type: TC
Location: 1747739 - 1749547 (+)
Gene ID: C38_contig_1047_1639
Type: pfam
Location: 1749600 - 1750325 (+)
Type: pfam
Location: 1749600 - 1750325 (+)
Gene ID: C38_contig_1047_1640
Type: TC
Location: 1750330 - 1751118 (+)
Type: TC
Location: 1750330 - 1751118 (+)
Gene ID: C38_contig_1047_1641
Type: CAZyme
Location: 1751275 - 1752921 (+)
Type: CAZyme
Location: 1751275 - 1752921 (+)
Gene ID: C38_contig_1047_1642
Type: TF
Location: 1752923 - 1753768 (-)
Type: TF
Location: 1752923 - 1753768 (-)
Gene ID: C38_contig_1047_1643
Type: pfam
Location: 1753950 - 1754813 (+)
Type: pfam
Location: 1753950 - 1754813 (+)
Gene ID: C38_contig_1047_1644
Type: TC
Location: 1754968 - 1755129 (+)
Type: TC
Location: 1754968 - 1755129 (+)
Gene ID: C38_contig_1047_1645
Type: TC
Location: 1755221 - 1756006 (+)
Type: TC
Location: 1755221 - 1756006 (+)
Gene ID: C38_contig_1047_1646
Type: TC
Location: 1756006 - 1756851 (+)
Type: TC
Location: 1756006 - 1756851 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Species
Megamonas funiformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.