dbCAN HGM

Cluster: C38.CMAG_7_CGC16

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	C38_contig_1047	C38_contig_1047_1282	1375879	1377126	+	2.A.1.46.5
TC	C38_contig_1047	C38_contig_1047_1283	1377203	1378519	-	2.A.22.5.2
TF	C38_contig_1047	C38_contig_1047_1284	1378655	1379566	+	HTH_1
TC	C38_contig_1047	C38_contig_1047_1285	1379589	1380245	-	2.A.115.2.3
pfam	C38_contig_1047	C38_contig_1047_1286	1380285	1381271	-	GFO_IDH_MocA \| Shikimate_DH \| GFO_IDH_MocA_C \| NAD_binding_3 \| F420_oxidored \| GFO_IDH_MocA_C3
CAZyme	C38_contig_1047	C38_contig_1047_1287	1381412	1383643	-	GH36
TF	C38_contig_1047	C38_contig_1047_1288	1383803	1384663	-	HTH_AraC \| HTH_AraC
CAZyme	C38_contig_1047	C38_contig_1047_1289	1384742	1386361	+	GH13_31
TC	C38_contig_1047	C38_contig_1047_1290	1386417	1386875	-	1.A.22.1.4

Gene ID: C38_contig_1047_1282
Type: TC
Location: 1375879 - 1377126 (+)

Gene ID: C38_contig_1047_1283
Type: TC
Location: 1377203 - 1378519 (-)

Gene ID: C38_contig_1047_1284
Type: TF
Location: 1378655 - 1379566 (+)

Gene ID: C38_contig_1047_1285
Type: TC
Location: 1379589 - 1380245 (-)

Gene ID: C38_contig_1047_1286
Type: pfam
Location: 1380285 - 1381271 (-)

Gene ID: C38_contig_1047_1287
Type: CAZyme
Location: 1381412 - 1383643 (-)

Gene ID: C38_contig_1047_1288
Type: TF
Location: 1383803 - 1384663 (-)

Gene ID: C38_contig_1047_1289
Type: CAZyme
Location: 1384742 - 1386361 (+)

Gene ID: C38_contig_1047_1290
Type: TC
Location: 1386417 - 1386875 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.