Cluster: C37.CMAG_4_CGC5
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: C37.CMAG_4
- CGC Family ID: CGCFAM_00824
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C37_contig_355 | C37_contig_355_263 | 291292 | 293346 | + | GH78 |
| CAZyme | C37_contig_355 | C37_contig_355_264 | 293352 | 295388 | + | CE20 |
| CAZyme | C37_contig_355 | C37_contig_355_265 | 295743 | 297929 | + | CBM67 | GH78 |
| STP | C37_contig_355 | C37_contig_355_266 | 298027 | 298989 | - | Sigma70_r4_2 |
| CAZyme | C37_contig_355 | C37_contig_355_267 | 299473 | 300543 | + | GH179 |
| pfam | C37_contig_355 | C37_contig_355_268 | 300555 | 301622 | + | GFO_IDH_MocA | GFO_IDH_MocA_C | KARI_N | GFO_IDH_MocA_C3 |
| pfam | C37_contig_355 | C37_contig_355_269 | 301626 | 302471 | + | AP_endonuc_2 |
| TC | C37_contig_355 | C37_contig_355_270 | 302491 | 304287 | + | 3.A.1.1.10 |
| TC | C37_contig_355 | C37_contig_355_271 | 304301 | 305176 | + | 3.A.1.1.29 |
Gene ID: C37_contig_355_263
Type: CAZyme
Location: 291292 - 293346 (+)
Type: CAZyme
Location: 291292 - 293346 (+)
Gene ID: C37_contig_355_264
Type: CAZyme
Location: 293352 - 295388 (+)
Type: CAZyme
Location: 293352 - 295388 (+)
Gene ID: C37_contig_355_265
Type: CAZyme
Location: 295743 - 297929 (+)
Type: CAZyme
Location: 295743 - 297929 (+)
Gene ID: C37_contig_355_266
Type: STP
Location: 298027 - 298989 (-)
Type: STP
Location: 298027 - 298989 (-)
Gene ID: C37_contig_355_267
Type: CAZyme
Location: 299473 - 300543 (+)
Type: CAZyme
Location: 299473 - 300543 (+)
Gene ID: C37_contig_355_268
Type: pfam
Location: 300555 - 301622 (+)
Type: pfam
Location: 300555 - 301622 (+)
Gene ID: C37_contig_355_269
Type: pfam
Location: 301626 - 302471 (+)
Type: pfam
Location: 301626 - 302471 (+)
Gene ID: C37_contig_355_270
Type: TC
Location: 302491 - 304287 (+)
Type: TC
Location: 302491 - 304287 (+)
Gene ID: C37_contig_355_271
Type: TC
Location: 304301 - 305176 (+)
Type: TC
Location: 304301 - 305176 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp003343765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C37_contig_355_266 | omnivore > vegetarian | 5.25412 | 0.02517 |