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Cluster: C37.CMAG_4_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C37_contig_355 C37_contig_355_2627 2987948 2989282 - 2.A.37.2.2
CAZyme C37_contig_355 C37_contig_355_2628 2989478 2990791 + GH13_20
TC C37_contig_355 C37_contig_355_2629 2990976 2992358 + 2.A.66.1.33
pfam C37_contig_355 C37_contig_355_2630 2992603 2993061 + Y1_Tnp
TC C37_contig_355 C37_contig_355_2631 2993283 2994905 + 2.A.21.2.1
NULL(UNKNOWN) C37_contig_355 C37_contig_355_2632 2995383 2999756 + NULL(UNKNOWN)
[View Structural Homologs]
pfam C37_contig_355 C37_contig_355_2633 3000261 3001922 + HMGL-like | LeuA_dimer | IPMS_D2
CAZyme C37_contig_355 C37_contig_355_2634 3002284 3003453 + GT4
Gene ID: C37_contig_355_2627
Type: TC
Location: 2987948 - 2989282 (-)
Gene ID: C37_contig_355_2628
Type: CAZyme
Location: 2989478 - 2990791 (+)
Gene ID: C37_contig_355_2629
Type: TC
Location: 2990976 - 2992358 (+)
Gene ID: C37_contig_355_2630
Type: pfam
Location: 2992603 - 2993061 (+)
Gene ID: C37_contig_355_2631
Type: TC
Location: 2993283 - 2994905 (+)
Gene ID: C37_contig_355_2632
Type:
Location: 2995383 - 2999756 (+)
Gene ID: C37_contig_355_2633
Type: pfam
Location: 3000261 - 3001922 (+)
Gene ID: C37_contig_355_2634
Type: CAZyme
Location: 3002284 - 3003453 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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