Cluster: C37.CMAG_2_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: C37.CMAG_2
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C37_contig_4097 | C37_contig_4097_292 | 311764 | 312954 | + | GH3 |
| pfam | C37_contig_4097 | C37_contig_4097_293 | 312961 | 313599 | + | LUD_dom |
| TF | C37_contig_4097 | C37_contig_4097_294 | 313754 | 314131 | + | GntR |
| TC | C37_contig_4097 | C37_contig_4097_295 | 314124 | 315017 | + | 3.A.1.124.2 |
Gene ID: C37_contig_4097_292
Type: CAZyme
Location: 311764 - 312954 (+)
Type: CAZyme
Location: 311764 - 312954 (+)
Gene ID: C37_contig_4097_293
Type: pfam
Location: 312961 - 313599 (+)
Type: pfam
Location: 312961 - 313599 (+)
Gene ID: C37_contig_4097_294
Type: TF
Location: 313754 - 314131 (+)
Type: TF
Location: 313754 - 314131 (+)
Gene ID: C37_contig_4097_295
Type: TC
Location: 314124 - 315017 (+)
Type: TC
Location: 314124 - 315017 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp000434995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C37_contig_4097_292 | vegetarian > omnivore | 1.10505 | 0.00067 |
| C37_contig_4097_292 | vegetarian > vegan | 1.13559 | 0.00731 |
| C37_contig_4097_293 | vegetarian > omnivore | 1.10530 | 0.00067 |
| C37_contig_4097_293 | vegetarian > vegan | 1.06385 | 0.00731 |
| C37_contig_4097_294 | vegetarian > omnivore | 1.64912 | 0.00067 |
| C37_contig_4097_294 | vegetarian > vegan | 1.08015 | 0.00731 |
| C37_contig_4097_295 | vegetarian > vegan | 1.43439 | 0.00731 |